Gene Cthe_2728 details

Gene Information

• Locus tag: Cthe_2728
• ID: 4810230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3219779
• End bp: 3220249
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640108147
• Product: 30S ribosomal protein S7
• Protein accession: YP_001039120
• Protein GI: 125975210
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000610678
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCAAGAA AAGGAAATGT GCCAAAGAGA GACGTATTAC CGGATCCAAT ATATAATGAC 
AAAGTAGTTG CAAAGCTTAT CAACAATATT ATGATTGACG GTAAAAAGAG TATAGCTCAG 
AAAATCTGTT ATGGTGCATT TGACATCATC AGGGAAAAAA CGGGAAAAGA CCCGTTGGAA 
GTGTTTGAAC AGGCTTTAAA CAATGTTATG CCTGTACTGG AAGTAAAACC GAGAAGAGTT 
GGTGGAGCAA CATATCAGGT TCCGGTTGAA GTAAGACCTG AAAGAAGACA GGCTCTGGCT 
CTCAGATGGC TGGTGGTTTA TGCAAGAGAG AGAAGCGAAA GGACAATGAA AGAGAGACTT 
GCGGCAGAAA TAATTGATGC GACCAATAAT ATGGGTGGAG CATACAAAAA GAAGGAAGAT 
ACCCACAAAA TGGCAGAAGC AAACAAAGCT TTTGCTCATT ACAGATGGTA A 

 

Protein sequence

MPRKGNVPKR DVLPDPIYND KVVAKLINNI MIDGKKSIAQ KICYGAFDII REKTGKDPLE 
VFEQALNNVM PVLEVKPRRV GGATYQVPVE VRPERRQALA LRWLVVYARE RSERTMKERL 
AAEIIDATNN MGGAYKKKED THKMAEANKA FAHYRW