| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2714 |
|---|
| Symbol | |
|---|
| ID | 4810708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3202721 |
|---|
| End bp | 3204388 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640108133 |
|---|
| Product | acetolactate synthase, large subunit |
|---|
| Protein accession | YP_001039106 |
|---|
| Protein GI | 125975196 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA CCGGTTCGAA AATATTAATT GAGTGCCTTA AGGAACAAGG TGTGGATACA
ATATTTGGAT TTCCGGGCGG AGCGGTATTG AATATATATG ATGAACTGTA CAGGTCGCAG
AATGAAATCC GGCATATACT GACTTCCCAC GAACAGGGAG CTGCTCATGC CGCAGACGGC
TATGCAAGGG CAACGGGAAA GGTTGGGGTG TGTCTTGCCA CATCCGGCCC CGGGGCCACA
AATCTGGTTA CAGGAATAGC AACCGCTTAC ATGGATTCGG TTCCGATGGT TGCAATTACA
GGACAGGTGG CGACGCCGCT CTTGGGCAAG GATTCCTTCC AGGAAGTTGA CATAACCGGA
ATAACAATGC CCATAACAAA ACACAATTTT ATAGTAAAGG ATGTTAACAA GCTGGCTGAC
ATAGTGCGAA GAGCCTTTTA CATAGCAAAA GAAGGAAGAC CAGGCCCGGT TCTGATTGAT
ATATGCAAAG ATGTAACGGC GGCATATGCT GAATATGAAC CAAAGTCCCC TCAGGAATTG
CCCGAGGTAC CTGTAAGAGT GGATGAAAAG TGTATTGATG AAGCGGCGGA GGCAATTAAC
AAAGCGGAAA GACCGGTTAT TCTCGCCGGA GGAGGCGTAT CAATCGCGGG AGCAAATAAA
GAACTTTTTG AGTTTGCAAC AAATGCCCAG ATACCAGTTA CCACAACTTT AATGGGCATG
GGTGCTTTCC CGGGAACCCA TGAGCTGTTC ATGGGAATGA TTGGAATGCA CGGCACAAAG
ACGACAAACA TGGCGGTTTC GGAATCGGAT CTTTTTATTG CGATTGGTGC AAGATTTAGT
GACAGAGTGA TAAGCAATGT TCAGAGATTT GCACCTAAAG CAAGCATAAT GCATATAGAC
ATTGACCCTG CCGAAATCGG AAAAAATATT AATGTTCAAT ATGCTCTTGA GGGAAACATC
AAGAAAATAT TGCAGCTTCT GAACGAGAGA GTAAAGAAGA AAGAATGCAC TGACTGGGTT
AGAAAAATCA ATGAGTGGAA GGAACTGTAT CCTCTTAAGT ATCCTCAGGA TGACAAGCTT
CATCCGCAAT ATATTATTGA GAGAATGTAT GAACTTACCA AAGGAGAGGC AATAATAACT
ACCGAGGTGG GTCAGCACCA GATGTGGGCC GCCCAGTTTT ACAAATACAC TTCTCCAAGA
CAGTTCCTGT CCTCAGGTGG TCTGGGTACC ATGGGATATG GTCTTGGAGC ATGCATTGGC
GCCCGGATTG GAAGACCCGA CAAAAAGGTA ATTAATGTTG CCGGTGACGG CAGCTTCAGA
ATGAACTGCA ATGAGCTGGC CACAGCTGTT GAGTACAAGC TTCCGATAAT AGTTGCGATA
TTCAACAATC ATGCTCTGGG AATGGTAAGA CAGTGGCAGC AGTTGTTCTA CGGCGGAAGG
TATTCCTCAA CCTCGCTGGA CAGATGTACA GACTTTAAAG CTTTGGCGGA AGCTTACGGT
GCAATCGGTA TAAATGTCAC AGCCAAAGAA GAAGTCGATG AAGCTTTAAA CAGAGCACTG
GCGTCTGAGG ATACCCCTGT GGTAATCAAT TTTGAAATTG ACAAGGATGA AATGGTATTT
CCTATTGTTC CGCCGGGAGC TCCTTTAAGC GAGCTTATTG AGGAGTAA
|
|---|
| Protein sequence | MKLTGSKILI ECLKEQGVDT IFGFPGGAVL NIYDELYRSQ NEIRHILTSH EQGAAHAADG
YARATGKVGV CLATSGPGAT NLVTGIATAY MDSVPMVAIT GQVATPLLGK DSFQEVDITG
ITMPITKHNF IVKDVNKLAD IVRRAFYIAK EGRPGPVLID ICKDVTAAYA EYEPKSPQEL
PEVPVRVDEK CIDEAAEAIN KAERPVILAG GGVSIAGANK ELFEFATNAQ IPVTTTLMGM
GAFPGTHELF MGMIGMHGTK TTNMAVSESD LFIAIGARFS DRVISNVQRF APKASIMHID
IDPAEIGKNI NVQYALEGNI KKILQLLNER VKKKECTDWV RKINEWKELY PLKYPQDDKL
HPQYIIERMY ELTKGEAIIT TEVGQHQMWA AQFYKYTSPR QFLSSGGLGT MGYGLGACIG
ARIGRPDKKV INVAGDGSFR MNCNELATAV EYKLPIIVAI FNNHALGMVR QWQQLFYGGR
YSSTSLDRCT DFKALAEAYG AIGINVTAKE EVDEALNRAL ASEDTPVVIN FEIDKDEMVF
PIVPPGAPLS ELIEE
|
|---|
| |