| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2707 |
|---|
| Symbol | |
|---|
| ID | 4810701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3193905 |
|---|
| End bp | 3194627 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640108126 |
|---|
| Product | ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| Protein accession | YP_001039099 |
|---|
| Protein GI | 125975189 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000874491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCTG TTTATAAAAA AGAACTTAAA ACATATTTCT ATTCTCCGTT GGCATATGTT
TTGTCCGGAA TATTTGTATT GGTTTTCGGA ATATACTTTT TAACTCAGAC AATGTCCAAA
GTGGGACAGG GTATTGCCCA GTTTGTGTTT GGTGGACAGC TTTATTTTGC AAGTTTTTGG
CTTGTCATGT TGATTCCCAT ATTGACAATG AGAGTGTTTG CTGAAGAGAG AAGAAACGGA
ACGGAAGTTT TGTTGATGAC TTCACCGGTG AGTGTTCCTC AAATAGTAAT AGGAAAATTT
CTTGCAGCAT TTACCGTATT TTTAACCATG ACGGCGCTGA CGGCAATTTT CCCTATTATA
ATATCCATAA AAGGTGAGCT GGTTCTTTCA GCCGCATTAT CCAGTTATCT CGGCTTTATA
TTGTTGGGAG CTTCGTTTGT GGCTTTTGGA CTTTTTACTT CTTCCATAAC GGAGAGTCAG
ATAATAGCCG CAGTGCTGGG AACCGTAACG CTGTTCTTTA TACTGCTTAT AGACCAGTTA
AAAACTTTGG TTTCCGGATT TTTACTAAAA GTAATAAATC AGTTGTCGCT GTATGAGCAT
TACAAGCAGT TTGTCCAGAG TGTAATCAGT TTGAACGATA TAGTGTTCTT TTTAAGTATA
ACGGCAATGT TCCTTTTGCT TGTGATGATA GTTATAGAAA AAAGGCGCTG GAGTCAGGGG
TGA
|
|---|
| Protein sequence | MWAVYKKELK TYFYSPLAYV LSGIFVLVFG IYFLTQTMSK VGQGIAQFVF GGQLYFASFW
LVMLIPILTM RVFAEERRNG TEVLLMTSPV SVPQIVIGKF LAAFTVFLTM TALTAIFPII
ISIKGELVLS AALSSYLGFI LLGASFVAFG LFTSSITESQ IIAAVLGTVT LFFILLIDQL
KTLVSGFLLK VINQLSLYEH YKQFVQSVIS LNDIVFFLSI TAMFLLLVMI VIEKRRWSQG
|
|---|
| |