| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2688 |
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| Symbol | |
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| ID | 4808860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3171893 |
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| End bp | 3173446 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640108107 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001039080 |
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| Protein GI | 125975170 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAA AATCGTTTAT AGGCAGTGCT GTCATTTTGA TGATAGCCAG TTTCATAGTT
AAAATAATTG GTTTTATTTA CAGAATATAC CTTTCAAACC TTATCGGCGC AGAAGGCATG
GGGTTGTTCC AGCTTATTTC CCCTGTGTAT TCCCTCATTA TCCTTACTTT GACTTCGGGA
GTGTCGATAG CTGTCTCCAA GATGGTGGCG GAAGAAATGG CAAAAGGCCA CCATGTCAAT
TTAAGGAGGA TTACGGGCTG CGCCCTGGTT ATTGTTTTAT TGGCAGGCTT GGCGGTTTCC
CTGCTGATTC TTATTTTTAT AAATCCTATA GTCAATGTAA TATTAAAGGA TTCCAGGACC
TATTATTCAA TGCTTCTTTT GATACCCTGT ATACCTGTGA TTGCAGCTGC ATCCGCCCTC
AAAGGGTACT TTTATGGTAT ACAGGATGTG GTGCCCACCG CATGCTCTCA AGTTGTGGAA
CAGCTTGTGA AAACATTTTT GGTTATGGCC ATGGCGGGCT ACTTCGTAAA TGTGGGACTG
GAATATGCCT GTGCTCTTGC GACTGTCGGA ATGGCACTCG GCGAGATTTC AAACCTGTTG
GTTTTGGTTG TAGTGTACAA ATTCAAGAAA AAGCGGGCTT GTGCGAATGC ATCCAAAAAA
GGCTTTATGA GAAAGCGAGT TATAGTTAAG GAGATTGTAA AAATATCAAT TCCTGTGTCT
TTCAACAGGT TTATCACTTC CATCATGTCC ACTGTAGAGT TTATTTTAAT CCCGAGAATG
CTTGTTTTGG GGGGCATGAC CTATCAAAAC AGCATACAGG AATATGGCAA ACTTACGGGA
ATGGCCATGC CGCTGGTTTT CTTTCCGTCC CTTGTGACAT CAGCTCTGGC GACGACTCTT
GTTCCGGCGA TTTCGGAAGC AATGTCCGTA AAAAGATACA AAACGGTCAA TTACAGAATG
TCAAAATCAA TACAACTTAC ATTTATAATG GGTTTTATAT TTTCAGCCAT TTTTATGCTC
TTTCCCGATA CAATAGGGGA TTTAATTTAC AGGAAGGAAA ATATCGGGCA TATATTGTAT
CTTCTCTCCT TTACCGGAAT ATTCATTTAT CTTCAGCAGA CCCTCCTGGG CATAATGAAC
GGCCTTGGGA AACAGGGAAT TCTTCTTAGA AACTCTATTG TGGGTTATGT AATAAGAATA
CTTTTTGTGA TTTACTTTGT TCCTTCATAC GGAATTGCAG GATATATTGC GGGTATGGTG
GTAAGTTCCA TATGCGTTTG CATACTGGAT ATTTCAACGG TAATCAAGAC AACAGGAATG
GCGCTTGATT TTAGAAATTG GATAATAAAA CCCGGCCTTG CGGGGGCAAT AATGCTTGTT
ATTGGGAAAT ACGTGCAAAG CTTCTTCACC ATATTTCACC TGGGACATTC ATGGACGGTT
GTACTCACTG TCTTTGGAAA TATTGTAATC GGTTTTTTGC TGATGTTTGT GCTGGGAGTT
CTGGATAAAG ATGAGATGTT GGCCATGGTA GGCTTAAAAA AAGTGCAGAG GTAA
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| Protein sequence | MAKKSFIGSA VILMIASFIV KIIGFIYRIY LSNLIGAEGM GLFQLISPVY SLIILTLTSG
VSIAVSKMVA EEMAKGHHVN LRRITGCALV IVLLAGLAVS LLILIFINPI VNVILKDSRT
YYSMLLLIPC IPVIAAASAL KGYFYGIQDV VPTACSQVVE QLVKTFLVMA MAGYFVNVGL
EYACALATVG MALGEISNLL VLVVVYKFKK KRACANASKK GFMRKRVIVK EIVKISIPVS
FNRFITSIMS TVEFILIPRM LVLGGMTYQN SIQEYGKLTG MAMPLVFFPS LVTSALATTL
VPAISEAMSV KRYKTVNYRM SKSIQLTFIM GFIFSAIFML FPDTIGDLIY RKENIGHILY
LLSFTGIFIY LQQTLLGIMN GLGKQGILLR NSIVGYVIRI LFVIYFVPSY GIAGYIAGMV
VSSICVCILD ISTVIKTTGM ALDFRNWIIK PGLAGAIMLV IGKYVQSFFT IFHLGHSWTV
VLTVFGNIVI GFLLMFVLGV LDKDEMLAMV GLKKVQR
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