Gene Cthe_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2666 
Symbol 
ID4808834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3145576 
End bp3148170 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content45% 
IMG OID640108081 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_001039058 
Protein GI125975148 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0153597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT ATTTTGAAAG TGTCGAGACC GTGCTCGAAC ATATGGGAAG CTCCAAAAAC 
GGCATTGACC CGAAGGAAGC TTCTTTGCGG CTCGAAAAAT ATGGCCGCAA CAAGCTGGAC
GAAGGCAAGA AAAAGACCGT CTTTGGCAGA TTTTTAGACC AACTGAAAGA TCCAATGATC
ATAGTTTTGA TTGTGGCCGC CATTATTTCA GGTTTTGCCG GAGAGCCGGC CGACTCAATC
ATCATACTGA TGGTCGTGCT CATAAACTCA ATACTGGGCG TAGTGCAGGA AGGAAAGGCC
GAAAAAGCCA TCGAAGCTTT GCAGAAAATG TCATCTCCTT ACTCAAAAGT CAGGAGAAAC
GGCCGGGTAA TGCAAATCAA GTCCGAAGAA ATTGTACCCG GTGATATAGT TCTCCTTGAA
GCAGGTGATG CCGTTCCTGC AGACATGAGG ATTATTGAAG CCTCAAGCCT TAAAATTGAA
GAAGCATCCC TTACCGGGGA ATCAATACCC ATCGAAAAAG ATGCCGGGGC AATACCTCCA
TCGGATAAAG ACATTCCTCT CGGTGACCGC CGCAACATGG CTTACATGGG TACCAATGTT
GTATACGGCC GCGGTGAAGG TATTGTGGTA AATACCGGAA TGTCAACGGA AATGGGTAAA
ATTGCAAATA TTATTTCCGG CACGGAAGAG GAAAAAACAC CTCTGCAAAA GAAACTTGCC
GAACTGAGCA AAGTGCTTAG CATAGCTGTA CTGGGAATTT GCATATTCAT ATTTGTCTTT
GGCGTATTAA AGAACGGAGG TTTTTCAAGA AACAACGTTC TGGAAATGTT TTTGCTGGCA
ATCAGTCTGG CCGTTGCTGC AATCCCTGAA GGTTTGGTAG CGGTTGTTAC CATTGTTCTT
TCCATCGGTG TCACAAAAAT GTCCAAACGC AATGCGATAA TCCGAAGACT TACCGCAGTT
GAGACATTAG GCTGTACACA AATTATTTGC TCCGACAAGA CAGGTACTCT GACTCAGAAT
AAAATGACTG TTGTAGATTC CTTCGGTGAC GTGGAAAAGC TTGCCGTTTC CATGGCTCTT
TGCAACGATG CCGCTTTGTC CGGGGAAAAC GGAGAAGTAA TCGGCGAACC TACGGAAAGT
GCCCTTGTAA GGTATGCTTT TGACATGGGC GTCAACAAAA ACGAACTGGA AAAATCAATG
CCCCGTGTCG CAGAAGCCCC TTTTGATTCA ATGAGGAAAA TGATGTCCAC AGTGCACAAA
ACCTCGGACG GAAAATTCAT TCAGTATACA AAGGGAGCAC CCGATGAGCT TTTGAAGAAA
TGCACTCACA TACTTACAAA AGACGGTGTA GTTCCTCTGA CAGACAAACA CCGCACTGAA
ATTCTCAATG AAAACAAGAG AATGGCAAAC AAAGCCCTTC GCGTATTGGC ATCGGCAATG
AAAGAGACAG ACACTTTGCC TTCCGACACA TCTCCGGAAA ACCTGGAGCG GGATTTGACA
TTTATAGGTC TTGCAGGCAT GATTGACCCT GTGCGCCCGG AGGTAAAAGC AGCAATTGAA
GAGTGCCGTG ATGCCGGTAT ACGTCCTATT ATGATCACCG GTGACCATAA AGACACCGCA
GTGGCCATTG CAAAGGAACT GGGCATTATA TCCGATGAAA GCCAGGCTAT CACCGGAGCG
GAACTATCTG AAATATCCGA CAGCGATTTT GAAGAAAAAG TTAATAATTA TTCCGTATAT
GCCCGGGTAC AGCCCGAACA CAAGGTACGA ATCGTAAATG CATGGAAAAA ACGCGGCAAG
ATTACCGCAA TGACGGGAGA CGGCGTCAAT GACGCTCCGG CTCTTAAATC CGCCGATATA
GGTGTCGGCA TGGGAATTAC CGGTACCGAT GTTACCAAAA ATGTGTCCGA CATGGTTCTG
GCCGACGACA ACTTTGCTTC AATCGTCCAT GCCGTTGAAG AGGGCCGCAG GATATATGAC
AACATCCGCA AATCCATACA GTTTCTTTTA TCTTCAAACT TGAGCGAAGT CATTGCACTG
TTTATAGCTA CACTTAGAGG ATTTATACTG TTTTCGCCCA TACACATTCT GTGGATTAAC
CTTGTAACCG ACTCATTACC TGCTATAGCA CTGGGTATGG AAGAAGCCGA AGAAGACATT
ATGAAAAGGC CTCCGCGCAG TGCAAAAGAA GGTATTTTCG CCCATGGTCT GGGCTTTAGC
GTAATATACC AAGGCATTGC CATTGCTGCT TTAACGTTGA TATCCTACTT TATAGGCAAC
ACACAGTCCC ATATAACAGG AACTACAATG GCATTTTTGA CAATGTCCGT ATGTGAAGTT
TTCCAGGCCC TCAACCTAAG ATCAATGACG AAATCAATTT TCAGATTGAA AACCCGCAAC
AAAGTCCTGT TTGGTGCAAT GGTTATGGCT TTCGTTTTAT CGCTGTTTGT AATATATGTA
CCGGGCATAA ACGACATATT CAAACTGACC CCGCTTTCGG GAGCAAACTT ACTTGTTTCA
ATTGCGCTGG CTTTTGCGAT TATTCCTATT GTGGAAACAG TCAAGTTTGT TATATATTTG
ATAAAGAAAG CATAA
 
Protein sequence
MKHYFESVET VLEHMGSSKN GIDPKEASLR LEKYGRNKLD EGKKKTVFGR FLDQLKDPMI 
IVLIVAAIIS GFAGEPADSI IILMVVLINS ILGVVQEGKA EKAIEALQKM SSPYSKVRRN
GRVMQIKSEE IVPGDIVLLE AGDAVPADMR IIEASSLKIE EASLTGESIP IEKDAGAIPP
SDKDIPLGDR RNMAYMGTNV VYGRGEGIVV NTGMSTEMGK IANIISGTEE EKTPLQKKLA
ELSKVLSIAV LGICIFIFVF GVLKNGGFSR NNVLEMFLLA ISLAVAAIPE GLVAVVTIVL
SIGVTKMSKR NAIIRRLTAV ETLGCTQIIC SDKTGTLTQN KMTVVDSFGD VEKLAVSMAL
CNDAALSGEN GEVIGEPTES ALVRYAFDMG VNKNELEKSM PRVAEAPFDS MRKMMSTVHK
TSDGKFIQYT KGAPDELLKK CTHILTKDGV VPLTDKHRTE ILNENKRMAN KALRVLASAM
KETDTLPSDT SPENLERDLT FIGLAGMIDP VRPEVKAAIE ECRDAGIRPI MITGDHKDTA
VAIAKELGII SDESQAITGA ELSEISDSDF EEKVNNYSVY ARVQPEHKVR IVNAWKKRGK
ITAMTGDGVN DAPALKSADI GVGMGITGTD VTKNVSDMVL ADDNFASIVH AVEEGRRIYD
NIRKSIQFLL SSNLSEVIAL FIATLRGFIL FSPIHILWIN LVTDSLPAIA LGMEEAEEDI
MKRPPRSAKE GIFAHGLGFS VIYQGIAIAA LTLISYFIGN TQSHITGTTM AFLTMSVCEV
FQALNLRSMT KSIFRLKTRN KVLFGAMVMA FVLSLFVIYV PGINDIFKLT PLSGANLLVS
IALAFAIIPI VETVKFVIYL IKKA