| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2627 |
|---|
| Symbol | |
|---|
| ID | 4808938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3105595 |
|---|
| End bp | 3106413 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640108040 |
|---|
| Product | pur operon repressor |
|---|
| Protein accession | YP_001039019 |
|---|
| Protein GI | 125975109 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
|---|
| TIGRFAM ID | [TIGR01743] pur operon repressor, Bacillus subtilis type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGT TTCATAGAAA TGAACGGCTT GCTGTTTTGA TGAAGACCCT GTGTGATTCA
CCGGGAGAGA CCTTTACCCT TGGAAGTTTT GCGGAAATGT TTGGTTCTGC AAAGTCCACA
ATAAGTGAAG ACATGGATAT TGTGCAGAAT TTGCTTCAAA AGTTTGACCT GGGGTCTGTC
GAAAGCATAG CCGGTTCAAC GGGGGGTATA AGATTTGTTC CCGGGTGCAA AAAAGAAAAA
GTGAAATCCG TTCTGAACTC CCTGTGCCAA GACTTGTCAA ACAGTCAGAG AATTCTTCCG
GGCGGATATT TGTATATGCT GGATATTATT TATGACCCTA AAAGGATATT CGAGATAGGA
TCTATTTTTG CGGGTTATTT TTTTAAAAGG GAAATAGATT GTGTCATTAC GGTGGAGACA
AAAGGAATCC CCCTTGCCTT TGCCACTGCA AAACAGCTGG GGGTGCCTTT GATGATAGCA
AGGCACAACA GTGAAGCCAC GGACGGACCT TCGGTAAACA TAAACTATGT ATCCGGCTCA
TCGAAGAAGA TTCAGACAAT GGTTCTTCCC ATGAGAGCTC TCAAAGGCCA TTCAAGGCTT
CTTTTCATAG ACGATTTCAT GAAAGGCGGA GGTACCGCCA AAGGCATAAT TGATATGGCA
AAAGAGTTTG AATGTGAGGT TGTGGGAATC GGAGTGTTTA TTGAAACTTT GGAGCCGGCT
AAAAAGCTGG TTGATGATTA TGTTTCTTTG ATTACCCTGA ATATTGTAAA TACGGAGGAA
AAACTTATAG ATGTAAAGCC CAGCAAAGAA TGGCTGTAG
|
|---|
| Protein sequence | MEKFHRNERL AVLMKTLCDS PGETFTLGSF AEMFGSAKST ISEDMDIVQN LLQKFDLGSV
ESIAGSTGGI RFVPGCKKEK VKSVLNSLCQ DLSNSQRILP GGYLYMLDII YDPKRIFEIG
SIFAGYFFKR EIDCVITVET KGIPLAFATA KQLGVPLMIA RHNSEATDGP SVNINYVSGS
SKKIQTMVLP MRALKGHSRL LFIDDFMKGG GTAKGIIDMA KEFECEVVGI GVFIETLEPA
KKLVDDYVSL ITLNIVNTEE KLIDVKPSKE WL
|
|---|
| |