| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2622 |
|---|
| Symbol | |
|---|
| ID | 4809044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3100348 |
|---|
| End bp | 3100698 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640108036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001039015 |
|---|
| Protein GI | 125975105 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3951] Rod binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00105053 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAA GTGCAATCAG CAATAAATAT TTGAACAATG CAATACAAAG CAGCAGTATA
AAGTCTTCCG ATGACGATTT TGAGAAAAAA CTTCAAAACG CTCTTGAAAA CAAGGATGAA
AAAGAACTTA AAAAGGTGTG CAAAGAGTTT GAAGGTATTT TGCTTGAGAT TATGTACAAA
CAAATGAGAG CCACAGTCCC AAAATCTGAC TTTATACCTG CTGATCCTGG AAGGGATATT
TTTGAAGATA TGCTGGACGA GGAACTTGTG AAGGAGGCTG CAAAGGCTGT CAATTTAGGC
CTTGCGGACA GCCTTTACAA GCAGCTTTCG AGAACTCTCA AATCCGAATA A
|
|---|
| Protein sequence | MDISAISNKY LNNAIQSSSI KSSDDDFEKK LQNALENKDE KELKKVCKEF EGILLEIMYK
QMRATVPKSD FIPADPGRDI FEDMLDEELV KEAAKAVNLG LADSLYKQLS RTLKSE
|
|---|
| |