Gene Cthe_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2597 
Symbol 
ID4809019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3068880 
End bp3069329 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID640108011 
Productribose-5-phosphate isomerase 
Protein accessionYP_001038990 
Protein GI125975080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0696545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GAATTGGAAG CGACCACGGA GGTTACAATT TAAAAAGGGA GATAGCCGAT 
TTTCTAAAAA AAAGAGGTTA TGAAGTCATA GACTTTGGAA CACACGGAAA TGAGTCGGTG 
GATTATCCGG ATTTCGGACT TAAGGTTGCA GAGGCTGTAA AAAGCGGCGA GTGTGACAGG 
GGTATTGTAA TATGCGGTAC CGGACTTGGC ATATCAATAG CTGCAAACAA GGTTCCGGGC 
ATCAGAGCTG CCGTATGCAC CAACAGTTAC ATGGCAAGAA TGAGCAGGGA ACACAATGAT 
GCCAATATCC TGGCTTTGGG AGAAAGAGTT GTGGGACTTG ATCTTGCTTT GGATATTGTT 
GACACTTGGC TCAAAGCTGA GTTCCAGGGA GGAAGACATG CCACCAGGGT TGGCAAAATC 
GGTGAGATTG AAAAAAAATA CAGCAAATAG
 
Protein sequence
MKIGIGSDHG GYNLKREIAD FLKKRGYEVI DFGTHGNESV DYPDFGLKVA EAVKSGECDR 
GIVICGTGLG ISIAANKVPG IRAAVCTNSY MARMSREHND ANILALGERV VGLDLALDIV 
DTWLKAEFQG GRHATRVGKI GEIEKKYSK