Gene Cthe_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2560 
Symbol 
ID4809167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3031251 
End bp3031799 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content37% 
IMG OID640107975 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001038954 
Protein GI125975044 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTGG ATATAAAAGA ATCAAAAATT ATCGGGTGTT ATGAGCTTAT CCCCAGAATT 
TTCAGTGACA ACAGAGGAAG GTTTGTAAAG ACGTTTCACG AGGAGGTTTT TGCTCAGGCA 
GGATTGGAAA CTAATTTTGC TGAAGAATAT TATTCTGTGT CACATAAAGG AGTGTTAAGG 
GGATTACATT TTCAGAAACC TCCCAGAGAG CATACAAAAG TAGTGTATTG TGTGCACGGC 
GAAGTTATGG ATGTAGTTGT TGATTTGAGG GTTGGTTCCC CAACTTATGG GAAATATGAC 
ATATTTGACT TAAACTCAGA TAAGGCAAAT ATGATTTACA TTCCAAAAGG ACTGGCTCAT 
GGTTTTTATG TAAAAAGTAA TCAGGCGATT CTTATCTACA AGGTCACTAC AGTTTATTCA 
CCCGAAAATG ACACTGGTAT CCGTTGGGAT TCAGTAGGTA TTCCGTGGCC AAATGATAAT 
CCCATTATGT CAGAAAGAGA TAGAATGCTG CCTGTATTTG AAGAAATGCA AAACATATTT 
ACCTATTAA
 
Protein sequence
MMLDIKESKI IGCYELIPRI FSDNRGRFVK TFHEEVFAQA GLETNFAEEY YSVSHKGVLR 
GLHFQKPPRE HTKVVYCVHG EVMDVVVDLR VGSPTYGKYD IFDLNSDKAN MIYIPKGLAH 
GFYVKSNQAI LIYKVTTVYS PENDTGIRWD SVGIPWPNDN PIMSERDRML PVFEEMQNIF 
TY