Gene Cthe_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2460 
Symbol 
ID4809840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2934086 
End bp2934514 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID640107875 
ProductXRE family transcriptional regulator 
Protein accessionYP_001038855 
Protein GI125974945 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0113682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTTA ATGAAATTCT CAGGCAGTTA AGAACAGAGA AAAACTTAAG CCAAAAAGAT 
GTAGCCGATG CTATTGGCGT AGATAGAACC ACATATACAA AATATGAAAC AGGCAAAAGC
CAACCTGACT TTGTCACAAT ACAGAAATTA GCTGAATTTT ATTCGGTATC AGTCGATTAT
CTTCTAGGTC GCACTGACAT CCGCAACCCC TACATCCCTG AAGAATACAC CCAAAAACAT
AAAGTGACCA AACGTGACCT AATGCAGTAT GAAGACTTCA TCAAGCAGGC CGGCATCTTC
TTCATGAACG ATGAGGTCGC AGAAGAAGAC AAAGAAAAGC TCTTTCGAGA TATATCCGAG
CTCTTCTGGA AGGCAAAGGA GATGAACAAG AAGAAATACG GCAGAAAAAA GGCAAAAACC
GACCAATAA
 
Protein sequence
MPFNEILRQL RTEKNLSQKD VADAIGVDRT TYTKYETGKS QPDFVTIQKL AEFYSVSVDY 
LLGRTDIRNP YIPEEYTQKH KVTKRDLMQY EDFIKQAGIF FMNDEVAEED KEKLFRDISE
LFWKAKEMNK KKYGRKKAKT DQ