Gene Cthe_2376 details

Gene Information

• Locus tag: Cthe_2376
• ID: 4811026
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 2838854
• End bp: 2840779
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640107787
• Product: DNA gyrase subunit B
• Protein accession: YP_001038771
• Protein GI: 125974861
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCAA TTAATAATGA AATGAGCAAG TATGACGAAA GTAACATACA GGTTTTGGAA 
GGTCTCGAGG CTGTGAGGAA AAGGCCCGGA ATGTATATAG GGAGCACCTC GTCAAGGGGT 
TTGCACCATT TGGTGTATGA GATAATGGAT AACAGTATAG ATGAAGCTCT TGCCGGATTC 
TGTAATGAGA TAAAAGTTAT AATACACAAG GATAATTCCA TTACAAATAT TGACAACGGC 
AGGGGAATAC CTGTCGGAAT ACATCCTAAA CTTGGCATAT CGACTGTTGA GGTTGTCCAT 
ACCATACTGC ATGCGGGCGG AAAGTTCGAC GGGCAAGGTT ACAAGGTATC CGGAGGACTT 
CACGGCGTGG GTGCTTCTGT CGTAAATGCG CTGTCTGAAT TTCTGGAAGT TGAAGTTTTC 
CGTGACGGAC ATATATACAG GCAAAGATAT GAAAGGGGAA AACCTGTAAC TCCGGTGGAG 
ATAATCGGAG ACACAAATTT GACAGGAACA AAAACTACTT TCAAACCTGA CCCTGAAATA 
TTTGAAGTAA CGGAATTTGA TTTTGAGGTT CTGCTTACAA GATTAAGGGA ACTTGCTTTT 
TTAAACAAGG GTCTTAAAAT CATATTAAGG GATGAAAGAC CTGAGGAGCC CGTTGAAAAG 
CATCTTCATT ACGAAGGCGG AATAGTATCT TTTGTAGAAT ACATGGACAG AAACAAAGAT 
CCGTTGCACG AACCGATTTA TTTTGACGGA TATAAAGATG GCTGTTATGT TGAGATTGCG 
ATGCAGTATA ACAAGGATGT ATATGTTGAG AATATTCACA GTTTTGCAAA TAATATATCT 
ACGGCCGAGG GAGGAACCCA CCTTACCGGA TTTAAAACGG CCATAACAAA AGTTCTTAAT 
GATTATGCTA AAAAATTCAA TTTTCTCAAG GAAAATGATA AAAACCTTTT AGGTGAAGAT 
GTAAGAGAAG GTTTGACCGC TGTCATCAGT GTAAAAATAC CCGACCCCCA ATTTGAAGGA 
CAGACGAAGA CCAAACTTGG TAACAGTGAG GTAAGAAGTT TTGTTGAAAG CATAATAAAT 
GAAAAATTTG CAAGTTTCCT TGAGGAAAAT CCGTCGGTAA CAAGACTTAT ACTGGATAAG 
TGTATAATGT CCGCCAGGGC AAGAGAGGCT GCACGAAAGG CAAGGGAACT TACAAGAAGA 
AAAAATGTTC TTGAAACCTC CACGCTTCCC GGAAAACTTG CTGATTGCAC TGAAAGAGAT 
CCTTCTCTTT GTGAAATATT TATTGTTGAA GGAGACTCTG CGGGAGGTTC GGCAAAGCAG 
GGTAGAAACA GGAGATTTCA AGCCATTCTG CCTCTTTGGG GTAAGATGCT CAACGTTGAA 
AAAGCCCGGG TGGACAAGGT TTATGGCAAC GATAAGCTTA CTCCGGTTAT AATGGCATTG 
GGAACAAATA TCGGACAAGA CTTCGACATA ACGAAACTTA GATACCACAA AATAATTATA 
ATGGCCGATG CCGATGTTGA CGGTGCACAT ATCAGAACGT TACTGCTTAC GTTTTTCTAC 
AGGTATATGA CTCCGTTGAT TACCAACGGT TATGTATATA TTGCACAACC TCCATTGTAT 
AAGATTACTA AAGGAAAAAC TGAACTTTAT GCTTACAATG ACAGTGAGTT GGAAAAGATA 
ATCCGAGAGA ACCAATGGAA AAAAGAAGAA TGCACAATAC AAAGGTTCAA GGGTCTGGGT 
GAAATGAATC CGGAACAGTT GTGGACTACC ACAATGGATC CGGAAACGAG GACTATTTTA 
AGAGTTGAGT TGGAAGACGC TATTGCGGCC GACGAAATTT TTACAATTTT GATGGGAGAT 
AAAGTTGAAC CGAGAAAAGA GTTTATCCAG GCCAATGCAA AACTTGTAAC CAATCTTGAT 
ATATAA 

 

Protein sequence

MQAINNEMSK YDESNIQVLE GLEAVRKRPG MYIGSTSSRG LHHLVYEIMD NSIDEALAGF 
CNEIKVIIHK DNSITNIDNG RGIPVGIHPK LGISTVEVVH TILHAGGKFD GQGYKVSGGL 
HGVGASVVNA LSEFLEVEVF RDGHIYRQRY ERGKPVTPVE IIGDTNLTGT KTTFKPDPEI 
FEVTEFDFEV LLTRLRELAF LNKGLKIILR DERPEEPVEK HLHYEGGIVS FVEYMDRNKD 
PLHEPIYFDG YKDGCYVEIA MQYNKDVYVE NIHSFANNIS TAEGGTHLTG FKTAITKVLN 
DYAKKFNFLK ENDKNLLGED VREGLTAVIS VKIPDPQFEG QTKTKLGNSE VRSFVESIIN 
EKFASFLEEN PSVTRLILDK CIMSARAREA ARKARELTRR KNVLETSTLP GKLADCTERD 
PSLCEIFIVE GDSAGGSAKQ GRNRRFQAIL PLWGKMLNVE KARVDKVYGN DKLTPVIMAL 
GTNIGQDFDI TKLRYHKIII MADADVDGAH IRTLLLTFFY RYMTPLITNG YVYIAQPPLY 
KITKGKTELY AYNDSELEKI IRENQWKKEE CTIQRFKGLG EMNPEQLWTT TMDPETRTIL 
RVELEDAIAA DEIFTILMGD KVEPRKEFIQ ANAKLVTNLD I