Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2360 |
Symbol | |
ID | 4808998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2820240 |
End bp | 2823026 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640107771 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001038755 |
Protein GI | 125974845 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAACTT CAATTATTGC CGTACCTTCT TATGTATCCG CCGAACCGGA ATATAATTTT GCCAAAGCGC TGCAGCTGTC CCTTTATTTC TACGATGCCA ACAAGTGCGG TGAGGGGATA ACCGGAGGAA GGCTTGAATG GAGAGGAGAC TGTCACTTAG AAGACAAGGA AGTTCCTCTT ATTCCGATGA CAGAGGATTA TTTCGGTACC AATATGTCAC AGGAATACAT TGACAAGTAC AGACATATTT TCGACCCTGA CGGAGACGGT ACCGTAGACT TAAGCGGCGG AATGCACGAC GCCGGAGACC ATGTCAAATT CGGGCTTCCG GGTACATACG CAGCATCAAC CCTGGGGTGG GGTTTCTATG AATTCAGAGA AGCTTATGAA AAAGTTGGAG TAGACGACCA TGCCAAAGAA ATTTTGAGAT GGTTCAATGA CTTCTACCTT AAGGCTACAT TTTTGGATGA AGACGGAAAC GTAATAGCTT ATTGCTATCA GGTTGGAGAA GGTAACATTG ACCATAATTT CTGGAATCCG CCTGAACTTC AAAGCTCCAA AGTACTTGAT TCGTTCGCCA GACCTGCTTA TTTTGCCACT CCGGAAACTC CTGCAAGCGA CCAATGTGCA GGTGCTGCGG CATCACTTGC AATAAACTAT CTTAATTTTA AAGATGAAGA TCCCGAATAT GCTCAAAGAT GCCTGGATAC TGCCATTGCC CTCTATGAGT TTGCAAAGAA ATACAGAGGA CTTGGTGAAT CCGGAGGATT CTACGGTTCG TCTTATGATC ATGACGAACT GGCGTGGGCC GCTGTCTGGC TCAACATTGC AACAGGAGAC ATGCAGTATA TAGATGACAT TGTTGCAACC GACAGCGAGG GAAATTATAT AGGATATATG CAAAGAATCA TTAAAGACAC AACCAACACA TGGCAAAATA TATGGGTTCA CTGTTGGGAT ACCGTTTGGG GCGGAGTATT TGCAAAACTT GCTCCAATAA CAAATACGGA AAGAGACTGG TATATCTTCC GCTGGAATCT GGAATACTGG TCCGGAATTC CTCATGAAAA TCCAAATGAC ACGACTTTCC TTGCTAAAAG TCCCGGTGGC TTCAGCGTCG TAAACGCATA CGGATCTGCA AGGTATAATA CAGCAGCCCA GCTTTGTGCC CTTGTATATA GAAAATATAC CGGCAGAAGC GATTTTGCTG ACTGGGCAAA AAGTCAGATG GAGTATATTA TGGGTAACAA CCCCATGAAC AGATGCTATA TCGTGGGATA TTCCGAAAAC AGTGCAAAAC ATCCTCACCA TCGTGCAGCC CATGGTTCCA AGACATTCAG CATGCTGGAT CCTGAAGAAC ACCGTCATAC ACTGTGGGGG GCATTGGTGG GAGGTCCCGA CCTTGACGAT TTCCATGTGG ATGAAACCAC AGACTATGTA TACAACGAAG TTGCCGTAGA CTACAATGCC GCTTTCGTCG GCGCCTGTGC AGGATTGTAT TATTACTATG GTGAAGCATT GGGACACAAA CCTGTTCCAA ACTTCCCGCC AAAAGAAGAA GCTGTAGAGG AGTATTATGT GGAAGGAAAA ATTGAACAGG AAAACAAGGA AAGAACCCAG GTAACCATCA AAATTTTCAA TGATACCTGC CATCCTCCCC GTTTTGAGAC CGGCTTGATG GCACGTTACT TCTTCAATAT TTCAGAACTT CTGGATGCAG GTCAAAGCAT CGATGACGTG AAAATAGAGG TTTATTACGA CGAAAACAAG GCAAGCTACG ACGGTCCTGC CGAGGTAAGA GGTCCTATCA AGTACGATGA CGCAGGCACC TATTATGTGG AAGTTGACTG GAGTGGCCGT ATTATTTACG GTAAACGCGA AATCCAGCTT GCACTGATAT CAAGCCTGGA TTCCAACTAC AAAAGCAACT GGAATCCGGA AAATGACTAC AGCAGGGAAG GATTGGGCAA GGAATTTGTC AGAACCGAAA AAATTCCTCT TTACCTGAAC GGCGTAAAAG TATTTGGAAA TGAGCCTCCT CAAATTGAAC CGTCGCCGAC GCCTTCGGAC GGACCGGGCT CAACACCGCC GCCGTCTCAA AAGCCTTCAT TGGAGGTTCT GTACAAATAC GGAGATACAA CGGCAGCTAC AAAAGATATC AGAGGCTCCA TTAAAATTAA AAATACAGGA ACAAAACCGG TAAATCTTTC CGACGTAAAA GTACGCTACT GGTTTACCAA AGACGGGGCT TCAAGTCAGG AATTTGTATG CGATTATGCG CATTTGTCTG AAAGCATGAT CACAGCAAAA TTCGTAGATC TTGAAAACCC GGTTGAAAAT GCGGATAATT ATCTTGAGAT TGGCTTTGAC AGCAATGCAG GTATTTTGGG ACCGGGCTCC GATACCGGCG AAATTCAATT CAGAATCGTA AAAGGAGATT ATGAGTCTTA TGATCAATCC AATGATTATT CCTGCATGGC TACTGCAAAA GACTTTACCG CAAATCCGAA CATTACGGCG TATGTAAATT CTGTTTTAGT GTACGGCAAC CCGCCGGTAG ATGAAGAGGA GGAAATTGAA ATAGTGTACG GAGATTTGAA CGGAGACGGA AGAGTAAATT CTACAGATTT GCTTCTGATG AAAAAACGTA TTATCAGGGA AATTGACAAG TTCAACGTTC CCGACGAAAA TGCAGACTTA AATCTGGACG GAAAAATAAA CTCTTCCGAT TATACGATAC TTAAAAGATA TGTTTTAAAG TCAATAGAAA AACTGCCCGT AAAGTAA
|
Protein sequence | MITSIIAVPS YVSAEPEYNF AKALQLSLYF YDANKCGEGI TGGRLEWRGD CHLEDKEVPL IPMTEDYFGT NMSQEYIDKY RHIFDPDGDG TVDLSGGMHD AGDHVKFGLP GTYAASTLGW GFYEFREAYE KVGVDDHAKE ILRWFNDFYL KATFLDEDGN VIAYCYQVGE GNIDHNFWNP PELQSSKVLD SFARPAYFAT PETPASDQCA GAAASLAINY LNFKDEDPEY AQRCLDTAIA LYEFAKKYRG LGESGGFYGS SYDHDELAWA AVWLNIATGD MQYIDDIVAT DSEGNYIGYM QRIIKDTTNT WQNIWVHCWD TVWGGVFAKL APITNTERDW YIFRWNLEYW SGIPHENPND TTFLAKSPGG FSVVNAYGSA RYNTAAQLCA LVYRKYTGRS DFADWAKSQM EYIMGNNPMN RCYIVGYSEN SAKHPHHRAA HGSKTFSMLD PEEHRHTLWG ALVGGPDLDD FHVDETTDYV YNEVAVDYNA AFVGACAGLY YYYGEALGHK PVPNFPPKEE AVEEYYVEGK IEQENKERTQ VTIKIFNDTC HPPRFETGLM ARYFFNISEL LDAGQSIDDV KIEVYYDENK ASYDGPAEVR GPIKYDDAGT YYVEVDWSGR IIYGKREIQL ALISSLDSNY KSNWNPENDY SREGLGKEFV RTEKIPLYLN GVKVFGNEPP QIEPSPTPSD GPGSTPPPSQ KPSLEVLYKY GDTTAATKDI RGSIKIKNTG TKPVNLSDVK VRYWFTKDGA SSQEFVCDYA HLSESMITAK FVDLENPVEN ADNYLEIGFD SNAGILGPGS DTGEIQFRIV KGDYESYDQS NDYSCMATAK DFTANPNITA YVNSVLVYGN PPVDEEEEIE IVYGDLNGDG RVNSTDLLLM KKRIIREIDK FNVPDENADL NLDGKINSSD YTILKRYVLK SIEKLPVK
|
| |