| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2355 |
|---|
| Symbol | |
|---|
| ID | 4808989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2808454 |
|---|
| End bp | 2810052 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640107762 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001038750 |
|---|
| Protein GI | 125974840 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.730681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGAGA ACAGATATTT GGTGGATTTT GACACAGATG AGCTGCCTAC GGAGTTTCAT
GATGTTATTA TAATAGGCAG CGGAATAGCA GGAGTTTACA CTGCGCTTGA AATACCTGAA
AAATACGATG TTGTCATACT CACAAAGGAA ACCATTGAAA TAAGCAACTC GGTTCTTGCC
CAGGGAGGAA TAGCCGTTTC CCTTGACAAA GGTGATTCTC CGGAGTTGCA TTTTAAGGAT
ACAATTTATG CCGGAGCAGG CCTGTGTGAC GAGGAAAGTG TGTGGGTTTT GGTTAACGAG
GCTGCGGCAA ATATTGAAAC TTTGTGCCAA TTTGGAGTCA ATTTCGACAG AAAAAGCAAT
GACGAGCTTG CCCTCTCGAG GGAAGGGGCT CACAGCAAAA ACAGGATTAT ACATGCCGGG
GATACAACAG GCAAGGAAGT TTGCGACAAG CTCATATCGG TGGTGAGAAC GAAACAGAAC
GTTAAAATAA AGGAAAGAGT TGCCGCGATA GATTTAATTA CCGAAGACAA TGTGTGCAAA
GGCATACTGG CCTATCATGA GGATAGTTCT TCCTATGTGT TTTACAGAGC AAATGTTGTG
GTGTGTGCAA CAGGAGGATA CGGGCAGTTG TACTCCAACA CAACAAATCC CGAAGTGGCA
ACGGGGGACG GGGCCGGTCT TGCCTACAGG GCCGGTGCGG AGCTCATGGA TTTGGAGTTT
GTGCAATTTC ATCCCACGGT TCTTTTCCAC CCCGAGAACA AAAGCTTTCT TATTTCCGAG
GCGGTAAGAG GGGAAGGTGC CATATTAAGA AATATTAAAG GCGAAAGGTT TATGCCCAAA
TATCATGAGC TTAAAGAGCT AGCACCCAGA GACATAGTTT CAAGATCCAT TTTTCATGAA
ATGCAAAAAA CAAATTCAAA CCATGTATAT CTGGATATCA CATTCAAAGG AAAGGAATAT
TTGGAAAACA GGTTTCCCAA TATTTACAAC ACATGCTTAA GTTACGGCAT AGATATGTCC
AAAGATTATA TTCCCGTTGC TCCGGCTGAA CATTACTGTA TGGGCGGAAT AAGGACGGAT
GTGTTTGGAC GCACAAATAT AAAAGGTTTC TATGCCTGCG GTGAAGTTGC ATGCAATGGA
ATACACGGTG CAAACAGGCT GGCCAGCAAT TCGCTTCTTG AAGGTTTGGT GTTTGGCCGC
AAGATAGGCA AAGAGGTGGA AAATGTAATT GAAGGCAGCC GAAAAGAGCC TCAAAAAGTC
AGTATCAAAG TGAAGTCAAA CAGGGTGGAA AAAAATATAG ATGTAAATAA AATTAAAAAG
GATATCCAGG AAACAATGAC CCGCTATGTT GGAATAGTAA GAGACAGGGA AGGACTTGAA
AAAGCAAAGA AAAAGGTTGA TGATTACTAC GAATTGATAA AAGATATGAA AAATAACAGC
GTAAGCGACT TTGAAATGCA AAACATTGTT CTTGTTTCAA AGCTTGTCAT TGAAGCGGCT
TTGGAACGCA AAGAAAGCCG TGGGGCGCAT TTTAGACTGG ATTATCAAAA AACTGACGAT
GAAAATTGGA AAAGAAACAT AATAAAAAGA AAAATTTAG
|
|---|
| Protein sequence | MDENRYLVDF DTDELPTEFH DVIIIGSGIA GVYTALEIPE KYDVVILTKE TIEISNSVLA
QGGIAVSLDK GDSPELHFKD TIYAGAGLCD EESVWVLVNE AAANIETLCQ FGVNFDRKSN
DELALSREGA HSKNRIIHAG DTTGKEVCDK LISVVRTKQN VKIKERVAAI DLITEDNVCK
GILAYHEDSS SYVFYRANVV VCATGGYGQL YSNTTNPEVA TGDGAGLAYR AGAELMDLEF
VQFHPTVLFH PENKSFLISE AVRGEGAILR NIKGERFMPK YHELKELAPR DIVSRSIFHE
MQKTNSNHVY LDITFKGKEY LENRFPNIYN TCLSYGIDMS KDYIPVAPAE HYCMGGIRTD
VFGRTNIKGF YACGEVACNG IHGANRLASN SLLEGLVFGR KIGKEVENVI EGSRKEPQKV
SIKVKSNRVE KNIDVNKIKK DIQETMTRYV GIVRDREGLE KAKKKVDDYY ELIKDMKNNS
VSDFEMQNIV LVSKLVIEAA LERKESRGAH FRLDYQKTDD ENWKRNIIKR KI
|
|---|
| |