| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2287 |
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| Symbol | |
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| ID | 4809876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2722448 |
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| End bp | 2723380 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640107693 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001038682 |
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| Protein GI | 125974772 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000984991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTAT TTACAAGAAG TTACGATAAA GACTGGAACC GCATTGTATA CTTAAAAGTA
TTGGAAAATC AAGAGGCATG CCTTCATCTG AAGGATGATA AGACTTGTAA ATTAATCCTT
TTGCTCGAAG GAAATCCCAC CATAAGATAT AATAATCAAA CAGCTTTTAT TATCGCACCC
TCTGTTCTTT GCCTGAATCA TTTGGACACC GTAGAATTTG ACTACAACCC CAACTGCAAG
ATGACAGTTC TCTTCTTTAG ACCAAGTGCC TTAAATGATC AGCTGGAATA CAGTGCATTT
CATTCAAATC TTTATGAAAA AATGGTTGGA ACAACGCTGT TTCAAGATAT GGTATTATTG
AGTTCATTTT ATGATATTAA CGATTCCAAA CGTGAGCTCA TCTTATTAGA CACTGTCTCA
GCTGTTAGTC TGATGCAATT ACTCAACAAA ATAAACCAAG AGCTGACAGA GCAGAAAGAT
GGCTATTGGC CATGCAGAAG CAGATCTTAT TTTATCGAAC TGCTCTTTTT CCTGGAAGGA
TTACGCTGTA ACGAGTCATT GCAGAAAATG CGCATCATAT TGGGCAAGAA TAAAAATAGT
ATTGTACATA ACATCATTCA GTATCTCAAT CAAAACATCG ACAAGAAAAT TACCCTTGAA
CATTTGGAAA AAACATTTGC ATGCAACCGA AATCAGATTA ATAAAGAATT TCAAAAGGAA
TTAAATACGA CAGTAATGAA ATATTTTACT CAAATGCGAA TGCAGCTGGC CAGCATCTTG
TTAAGAGACA CCGAAATACC GATACTCGAA GTTGCGCTAA GAGTAGGGTA TTCCGATGCC
GGTTATTTTT CCAAAACATT TAAATTATAT AGCGGTATAT CCCCCAGTGA ATATCGTAAT
TCCTTTTATT CTACGATATC ACCGGCTTTA TAG
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| Protein sequence | MDLFTRSYDK DWNRIVYLKV LENQEACLHL KDDKTCKLIL LLEGNPTIRY NNQTAFIIAP
SVLCLNHLDT VEFDYNPNCK MTVLFFRPSA LNDQLEYSAF HSNLYEKMVG TTLFQDMVLL
SSFYDINDSK RELILLDTVS AVSLMQLLNK INQELTEQKD GYWPCRSRSY FIELLFFLEG
LRCNESLQKM RIILGKNKNS IVHNIIQYLN QNIDKKITLE HLEKTFACNR NQINKEFQKE
LNTTVMKYFT QMRMQLASIL LRDTEIPILE VALRVGYSDA GYFSKTFKLY SGISPSEYRN
SFYSTISPAL
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