Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2260 |
Symbol | |
ID | 4809998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2688963 |
End bp | 2689799 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640107666 |
Product | prephenate dehydratase |
Protein accession | YP_001038655 |
Protein GI | 125974745 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAAA TTGGTTTTTT GGGCCCCAAA GGAACTTTTT CACAGGAAGC GATGCTTGCA TATACGAAGG GGAGCAATGA TTTTGTCGGG GTTGATTACA ACACAATGGT GGAATTGATT ATGGCAGTGG AGAATGACGA GATCGATGAA GCCGTTGTAC CAATAGAGAA CTCTCTTGAG GGCGCTGTAA GCACTACGAT GGATATGCTT GCATGGGATG TGGACCTTAA AATCAAGGCC GAGGTTGTTA TTGAAATAAA ACAGAATCTC ATGGCAAAGA AAGGTACGGA CATTAAAGAT ATAAAGTATA TCCTTTCCCA CCCCCAGCCC GTTGGACAGT GCAGGAAGTT TTTGAATTCC GTTTTTCCCC ATGCGGTTGT AAAATATGTG TACAGTACCG CACAGGCAGC AAAGGAGGTT GCACAGGGGG ATGGAAATAT GGCTTCAATT GGCTCTTTGG CGGCGGCAAA AGAATATGGG CTTGAGGTTC TTAAAGAGTC CATCCAGGAT AACGACAAAA ACTTTACCAG ATTTGTGGTA ATTTCAAAAA AAGAAGCAAA AAAAGCCGAA AAGAACAAAA CTTCCATAGT TTTTTCAACG GAAAACAAGC CGGGCAGCCT TTACAGAATA CTGGACATAT TCAACCTGTG GGACATAAAC ATGACAAGGA TAGAATCAAG GCCTGCAAAA AACGAGTTGG GCAAGTACAT ATTCTTTGTG GATATAAACG GGCATATAGA GGATGAAGAT GTCAGGGATG CCTTAACAAT GGTAAGAAGA AAGACTTCCT TTTATAAATT TTTGGGTTCT TATCCGGAAT TTGAAATAGG ATGTTGA
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Protein sequence | MVKIGFLGPK GTFSQEAMLA YTKGSNDFVG VDYNTMVELI MAVENDEIDE AVVPIENSLE GAVSTTMDML AWDVDLKIKA EVVIEIKQNL MAKKGTDIKD IKYILSHPQP VGQCRKFLNS VFPHAVVKYV YSTAQAAKEV AQGDGNMASI GSLAAAKEYG LEVLKESIQD NDKNFTRFVV ISKKEAKKAE KNKTSIVFST ENKPGSLYRI LDIFNLWDIN MTRIESRPAK NELGKYIFFV DINGHIEDED VRDALTMVRR KTSFYKFLGS YPEFEIGC
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