Gene Cthe_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2248 
Symbol 
ID4809986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2674752 
End bp2675414 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID640107654 
Productphosphoribosyltransferase 
Protein accessionYP_001038643 
Protein GI125974733 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000079712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACT GGATTATAAA TCTCATATTT CCCCCAAAGT GCATATTCTG CGGAACAATT 
TTGGGTACAA ATACTAAAAT AGAAATATGC AAAGAGTGCT ATGAAAAGAT TGATTTCAAG 
GAAGGAGCAA GTATAAGCTT CCAGGGACAA TACAACTACT ACGACAGTGT TGTCTGTGTA 
TGCGACTACA GCGGCATTGT AAAGGAAGCC ATAAGAAAAT ACAAGTTTTA CAATAAGCCT 
TCTTATTACA GAACCTTTGC ACGGCTTTTG GCACAAAAAA TAAAGGAATT GATCCAGTGG 
CAGAAATTTG ACATGATTGT AAGCGTTCCT CTTCACCCGG AAAGGGAACG AAGCCGCGGA 
TACAATCAGT CGTACCTTAT TGCCCGGGAA CTTGGCCGTG AGCTGGGGAT AAAGAATGAG 
GCAAAAATTT TGAAAAGGGT TAGAAATACT TACAGCCAAA GCCTTCTTAA GAAGGAAGAC 
AGGCTTGTGA ACGTAAAGGA TGCATTTAGA ATAACCGATA GATCCAAAGT TGAAGGAAAA 
GCAATGTTTC TTGTGGATGA CATTTTGACT ACCGGAACGA CACTGAACGA GTGCAGCAGG 
GTGTTGAAAG AGGCAGGGGC GAAAAAGATT GTGGTCGCTG TCATTGCGTC GGGAAGAAGG 
TAA
 
Protein sequence
MVNWIINLIF PPKCIFCGTI LGTNTKIEIC KECYEKIDFK EGASISFQGQ YNYYDSVVCV 
CDYSGIVKEA IRKYKFYNKP SYYRTFARLL AQKIKELIQW QKFDMIVSVP LHPERERSRG 
YNQSYLIARE LGRELGIKNE AKILKRVRNT YSQSLLKKED RLVNVKDAFR ITDRSKVEGK 
AMFLVDDILT TGTTLNECSR VLKEAGAKKI VVAVIASGRR