Gene Cthe_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2236 
Symbol 
ID4809974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2664170 
End bp2664988 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content44% 
IMG OID640107642 
Productflagellin-like protein 
Protein accessionYP_001038631 
Protein GI125974721 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTA ACAACAACAT TATGGCGTAC AACGCCCACA GACAATTAAA AGTAAATGCG 
TCAGCGCAGG AAAAATCCTT GGAGAAATTG TCATCAGGCT ACAGAATTAA CAGAGCTGGT
GACGATGCGG CAGGTCTGTC CATATCCGAA AAAATGAGAG CGCAGATCAG AGGTCTGCAA
ATGGCGTCAA AGAATGCCCA GGACGGTATT TCATTGATCC AGACTGCAGA AGGAGCCTTA
ACTGAAACCC ATGCCATCCT TCAAAGAATG AGAGAGCTTG CAGTACAGGC AGCAAACGAT
ACAAACGTGA CAAAGGACAG AAGTGCGATC CAGCTCGAAT TGAATGAATT GGCTGCTGAA
ATTACCAGAA TAGGTGAAAC TACGCAGTTC AACACTCAGA AATTGTTGGA TGGAACCTTT
AGTGGAAGAG TATTGCAGAT TGGTGCCAAT AAAGGTGAAA CTCTTTCTAT TGAAATAGGA
GATATGACAG CTACTGCGTT ACACGTAAAT GCTGATAATT TATCTGTAGA AACATCTGAT
GATGCCCAGG ACACTATTGA ACTGGTTGAC CAAGCAATTA ACATAGTATC AGGAGAAAGA
GCGAAACTTG GAGCGAAACA GAACAGACTG GAGCACACAA TAAAGAACCT TGACACAGCA
GCAGAGAACC TGCAGGCATC TGAATCAAGA ATCAGAGACG TAGACATGGC ACAAGAAATG
ATGAACTTCA CAAAGAACAA TATCCTCAAC CAGGCTGCCA TAGCAATGCT GGCTCAGGCT
AACCAAGTTC CGCAGGGCGT TCTTCAGTTA TTGGGCTAA
 
Protein sequence
MRINNNIMAY NAHRQLKVNA SAQEKSLEKL SSGYRINRAG DDAAGLSISE KMRAQIRGLQ 
MASKNAQDGI SLIQTAEGAL TETHAILQRM RELAVQAAND TNVTKDRSAI QLELNELAAE
ITRIGETTQF NTQKLLDGTF SGRVLQIGAN KGETLSIEIG DMTATALHVN ADNLSVETSD
DAQDTIELVD QAINIVSGER AKLGAKQNRL EHTIKNLDTA AENLQASESR IRDVDMAQEM
MNFTKNNILN QAAIAMLAQA NQVPQGVLQL LG