Gene Cthe_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2233 
Symbol 
ID4809971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2660402 
End bp2661814 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content38% 
IMG OID640107639 
Producthypothetical protein 
Protein accessionYP_001038628 
Protein GI125974718 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGC TGAAGAATAA TCTGGAGTTG CTTAAAAAAA GATATCCGGA AATATATAAT 
GAAATAAAAG ACATTCATGT GGATTCCAAT GCGTATCAGA TTATACAAAA CAATGAAGGA
CAAAAGACTT TAAAGGTGAC TTTGGACCTG TATGGCGAGA ATAAAAGCTT CTTTTTGCAC
AGTAAATATC ATCCGGATGT TGAAGCAGAC AGATTTGCGC GGGAACAATA CAAACCGGAA
TTTTCCATAC AAATTCTCTA CGGATTTGGA TTGGGTTATC ATGTTGAAAA AATTGCCGGA
CTTTTAAAAC CGGACAGCAT GCTGTATGTT ATAGAAAATA ATTTGATGGT TTTCAGGTCG
GCATTGGAAA ACATGGACTT ATGCCCTATT TTGGAAAATC GGAATGTTTC CCTGATTGTT
TCAAAGGATG TTGGCTATAT ATCGGAAAAA GTTAAGGAAT TAATTGATAA CAACCTTGAC
AAGGTCAGTT TTATAACACA TCCCGCTTCA TTGAAAGCAA TTCCTGAGGA AAACGAATAT
TTCAAATTTG TAATGGAGAA CTGGAATCTT AAGAAAAGTA TTACCGATGA TTATGACAAT
ACTTTGCGCA ATAATGCAAA AGAAAACTTA AAGTTAAACA GTCCGAATGT AGGCATCTTT
TTTGACAAGT TCAAAGATGT TCCGATAATC ATTGTGTCTA CAGGCCCTTC CCTTGATAAA
AACATAGATT TGCTTAAAGA GGCCAAGGGA AGGGCATTGA TTATTTCAGC CGGTTCTGCC
TTAAGACCTC TGCTTATGAG GAATATAAAG CCGGATTTCT TTGCCATTAT TGACCCGCAG
GATATAACCT ACAACCAGAT AAAGGGATAT GAAAATATCG GTATTCCTTT TATTTATCTG
GTTACTGCCG CTTCCTATAC CGTTTCACGT TACCTGGGGC CGAAACTGGT GGCTTATTAC
GGAAAGTACA ATAATAGTTC GGAACATTTG GTGGATTCGG GAGGCTCAGT TGCGACCACT
ATACTGGACA TAGCCATTAA AATGGGAGGA AATCCTATCA TATTAGTGGG ACAGGACCTG
GCGTATGTCG ACGGAAAAAA TCATGCCCAA TATGGGAGCC ATGCCAGCAT TTACTCACCT
GAGCTTAAAA ACATGAGAAG GGTAAAAGGG CAAAACGGAG AGATGCTGTA TACATCCCTG
GGACTGCTAA GTTATAAATA CTGGATTGAA AACAGGATAC AAAAAGAGAA AAGAATATTC
ATAAATGCCA CCGAAGGCGG AGCTTATATC GAAGGAATGA AACATATCAA GTTAAGGGAC
GTAATTTCCG ATTATCTAAA AGAAAGTTTC GATTTTGAAA ATAAAATAAA ATCCATACTG
AAAGAGAGCG GGATCCAACA TGTTCAAGGA TAA
 
Protein sequence
MTMLKNNLEL LKKRYPEIYN EIKDIHVDSN AYQIIQNNEG QKTLKVTLDL YGENKSFFLH 
SKYHPDVEAD RFAREQYKPE FSIQILYGFG LGYHVEKIAG LLKPDSMLYV IENNLMVFRS
ALENMDLCPI LENRNVSLIV SKDVGYISEK VKELIDNNLD KVSFITHPAS LKAIPEENEY
FKFVMENWNL KKSITDDYDN TLRNNAKENL KLNSPNVGIF FDKFKDVPII IVSTGPSLDK
NIDLLKEAKG RALIISAGSA LRPLLMRNIK PDFFAIIDPQ DITYNQIKGY ENIGIPFIYL
VTAASYTVSR YLGPKLVAYY GKYNNSSEHL VDSGGSVATT ILDIAIKMGG NPIILVGQDL
AYVDGKNHAQ YGSHASIYSP ELKNMRRVKG QNGEMLYTSL GLLSYKYWIE NRIQKEKRIF
INATEGGAYI EGMKHIKLRD VISDYLKESF DFENKIKSIL KESGIQHVQG