Gene Cthe_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2229 
Symbol 
ID4811094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2656764 
End bp2657816 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content41% 
IMG OID640107635 
ProductN-acetylneuraminate synthase 
Protein accessionYP_001038624 
Protein GI125974714 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03586] pseudaminic acid synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGCA GAAGAATTAA AATAGGGAAT CGGGAAATTG GTGAAGGATG TCCCTGTTAT 
ATTATTGCGG AAATGTCTGC GAACCATGCA GGAGATTTAG GCAAAGCAAT CGAAATAATA
CATGCGGCGA AAGAAGCCGG GGCGGATTGC ATAAAAATAC AGACTTATAC ACCGGATACC
ATGACCATAA ACTGTGATAA AAAATATTTT CATATAAATG ACGGAACCTG GAAAGGTGAA
AATTTATACG GTTTGTACCA GAAGGCAAAT ACTCCGTGGG AATGGCACGC ACGGCTCAAA
GAAGAAGCCC AAAAAGCAGG AATTGATTTT TTTTCAACTC CGTTTGACAA ATCGGCTGTG
GATTTTTTGG AGGATTTGGG AGTTGAATTT TATAAAATAG CTTCTTTTGA GGTTGTAGAT
ATTCCCTTGA TAAAATATAT TGCATCAAAG AAAAAACCTA TTATTATGTC AACAGGTATG
GCAACTTTGG GTGAAATTGA AGAAGCGGTG GAAACCATTA GGTCACAGGG TAATGACAAC
TTCTGCCTTT TAAAATGTTC CAGTGCTTAT CCGGCCGTTC CGGAACAAAT GAATTTGAAA
ACCATAGCTC ATTTGAAAGA GACATTTAAT GTTCCCGTGG GATTGTCGGA TCATTCTTTG
GGTTCGGTTT CTGCAGTTGT GGCGGTTGCC ATGGGGGCAA GCATTATTGA AAAGCATTTT
TGTCTGAGCA GGGAAATTAA AAGTCCCGAT TCGTCCTTTT CAATGGAACC GGATGAATTC
AAAAAGATGG TCGAAGATAT AAGAGCTGCG GAAAAGTCAA TAGGGAAGGT AAGCTACAGT
ATTTCAGAAA ATGAAGCCGT AAGCCGCAGT CACAGAAGAT CGATTTTTGT TGTGAAAGAT
ATAAAAAAGG GTGAAGCTTT TACAGAAGAG AACATAAGGA TAATAAGACC GGCAGACGGT
TTGGAGCCAA AATACTTTGA GCAGGTTTTA AACCGGAGGG CGTCGCAGGA TATTGAGAGG
GGGACACCGC TGAAGTGGAC AATGATAAGC TGA
 
Protein sequence
MQSRRIKIGN REIGEGCPCY IIAEMSANHA GDLGKAIEII HAAKEAGADC IKIQTYTPDT 
MTINCDKKYF HINDGTWKGE NLYGLYQKAN TPWEWHARLK EEAQKAGIDF FSTPFDKSAV
DFLEDLGVEF YKIASFEVVD IPLIKYIASK KKPIIMSTGM ATLGEIEEAV ETIRSQGNDN
FCLLKCSSAY PAVPEQMNLK TIAHLKETFN VPVGLSDHSL GSVSAVVAVA MGASIIEKHF
CLSREIKSPD SSFSMEPDEF KKMVEDIRAA EKSIGKVSYS ISENEAVSRS HRRSIFVVKD
IKKGEAFTEE NIRIIRPADG LEPKYFEQVL NRRASQDIER GTPLKWTMIS