| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2190 |
|---|
| Symbol | |
|---|
| ID | 4810906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2608713 |
|---|
| End bp | 2609894 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640107596 |
|---|
| Product | N-acetylglucosamine 6-phosphate deacetylase |
|---|
| Protein accession | YP_001038585 |
|---|
| Protein GI | 125974675 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TGAAGCTTGT AAAAAACGGA CTTGTTTTAG ACAGTCAAAA AGGTTTTGAA
GTAAATGATA TATTGATTGC CGGTGGGAAA ATTGCAAAGA TTGGTAAGAA TATTGAAGTT
TCGGAAACGG ACTATGAAGT CCTGAATGCT GAAGGCTTTT ATGTTGTTCC GGGATTTATT
GATGTACACA TGCATGGAGC GGCAGGTGTC GATATTATAA AGGCAGACCC GGGCCGGTTA
AATGAGCTGT CTTTGTTTCT TGCATCCAAA GGAGTTACGT CTTTTCTTGC TACAGTTATG
ACTGATTCCA GGGAGAATAT CTGCCGTGCC GTTGAGAATA TCCGTCTTGC CGTGGAAAGA
GGATTGGATG GTGCCAAAAT AGCCGGCATT AACCTGGAGG GGCCGTTTAT AAACCCAAAA
TACAGGGGAG CTCACCCGCC GGAATATATA CTGGAGCCTG ATGTGAAATT AATCGATGAA
CTTGTTGAAA AATCAGGAAA TAATATAAAG CTTGTTACGG CTGCGCCTGA ATTGGACAAA
ATTGAGGAAA TTATCCGAAA GTTCAAAGAA GACATAATTT TTAGTGCGGG ACATTCCGGT
GTTGATTTTG CCGGGGCGAA AGAAGCCTTT AAAAATGGTT TTAAACATGT CACTCACCTT
TTTAATGCAA TGACAGGTAT TCATCACAGG GAGCCGGGGC TTGCAGGAGC GGCGTTGGAC
AGCGACGATG TCACTGTGGA AATAATTCCC GACCTGATAC ATGTGCATGG AGCGGTAATT
CAAATGGTTG TCAAGTGTAA AACACCGGAC AGGGTGGTTC TTGTAACCGA TTCTATTTTG
GCGGCCGGAC TCGGAGAGGG AAAACTTGAG TTTGCAGAAA GCATGATTAC AGTTAAAGAC
GGTGCGGCCG TTTTTGAAAA CGGTGTGTTG GCCGGAAGTA CCATTACGAT GGCAGACGGT
ATCGGAAATA TGGTGAAAAA ATTGGGATTC AGCCTTGAGG ATACAATAAA AATGGCTTCA
ACAAATCCTG CCAAACTTAT AAACATTTTT GACAGGAAGG GAAGCCTGTC AGAAGGAAAA
GATGCAGATA TTGTAATATT GGACAGAAGT CTGAATATCC ATGAAACAAT AATACAGGGA
ATTACGGTTT ACTCTACATT TCCATACCCT CAGAGTAGGT GA
|
|---|
| Protein sequence | MEKMKLVKNG LVLDSQKGFE VNDILIAGGK IAKIGKNIEV SETDYEVLNA EGFYVVPGFI
DVHMHGAAGV DIIKADPGRL NELSLFLASK GVTSFLATVM TDSRENICRA VENIRLAVER
GLDGAKIAGI NLEGPFINPK YRGAHPPEYI LEPDVKLIDE LVEKSGNNIK LVTAAPELDK
IEEIIRKFKE DIIFSAGHSG VDFAGAKEAF KNGFKHVTHL FNAMTGIHHR EPGLAGAALD
SDDVTVEIIP DLIHVHGAVI QMVVKCKTPD RVVLVTDSIL AAGLGEGKLE FAESMITVKD
GAAVFENGVL AGSTITMADG IGNMVKKLGF SLEDTIKMAS TNPAKLINIF DRKGSLSEGK
DADIVILDRS LNIHETIIQG ITVYSTFPYP QSR
|
|---|
| |