| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2185 |
|---|
| Symbol | rpsR |
|---|
| ID | 4810901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2604434 |
|---|
| End bp | 2604718 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640107591 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_001038580 |
|---|
| Protein GI | 125974670 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000547556 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTC CTAAGAAGGA TAAGAACAAT AAAGAGGTAG ATAAAACTGA TGTTAAAACT
CCTGTAAAGG TCAGAAGGGC AAAAAAGAAA ATTTGTGCCT TCTGTGTTGA TAAAGTGGAG
AGAATAGATT ACAAAGATGT GGCCAAGCTG AAGAAGTACA TTTCCGAAAG AGGCAAGATA
TTGCCAAGAA GAATATCCGG AAACTGTGCA AAACATCAGC GCCAGTTGAC AGTTGCCATA
AAGAGGGCAA GACATATTGC TTTGCTGCCT TACACGGCGG ATTAA
|
|---|
| Protein sequence | MSTPKKDKNN KEVDKTDVKT PVKVRRAKKK ICAFCVDKVE RIDYKDVAKL KKYISERGKI
LPRRISGNCA KHQRQLTVAI KRARHIALLP YTAD
|
|---|
| |