Gene Cthe_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2180 
Symbol 
ID4810895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2596971 
End bp2598278 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content41% 
IMG OID640107585 
ProductCl- channel, voltage gated 
Protein accessionYP_001038575 
Protein GI125974665 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000426596 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTA TGAAACAATC AACCACTTTT TACCGCAATC AATTTATCAT GTGCATTGCA 
GCCATTCCGC TCGGTGCAGT AACAGGTGCA ATCTGTGCCG TTTTTGGCTT AACCTTGCTT
AAGATTACAG ATTACAGAAC CAATCATTAT CTTTATCTGC TTCCGTTTCT TGGAATCGCC
GGCGTCTTCA TTACTTGGTG TTACAACAGG TTTGGCAACG ACAGTGCAAA AGGAATGGCT
CTTTTGTTTG AAATACACCA AGACAAGCGC TCATCCATTC CTTTAAGGCT CATTCCTTTC
GCAGTGGGCA GTACATGGCT GACCCATTTG TTTGGAGGCA GTGCGGGCCG CGAAGGAGTT
GCCACACAAA TCGGCGGTAC TTTGGGCAGC TATATAGGGA ATAAAATCAG AGTTTCCGGG
GCAAATAAAA TATTAATGAT TTCCGGCATG GCGGCAGGTT TCAGCGGTTT GTTTCACACA
CCTCTTGCAG CCGTTTTTTT TGCTCTTGAG GTTCTTCACT GTGGAGTAAT TGAGTATTCC
GCACTTCTTC CGTCGTTCGT ATCCGCCTAT ACTGCAAGCT GCATTTCAGA AATTCTTGGC
CTTCAAAAGT CAACTTATTT TTTAGATTGT AGAATAGTGC CAAGCTTTTC CTTCATAATG
AAGATAATCG TATTAGGTGT ACTGTTCGGT CTTACAGGCA TGCTGTTTTC AATTTTGCTG
AAGAAATTAA GAGCGCTGTT AACAAATTAT ATAAAAAATA ATATTATACG AATATTTGTA
TTCGGTACAA TTATCGGTAT TATTTCTATC ATCTGTTTTC AAGGCAGATA TTCCGGGCCG
GGTACAAACC TCATTTCGGC ATGTTTTTCG AACGACATTA TGCCATGGGA TTTTATGCTC
AAAATACTCT TTACTGCGTT GACTCTGGCA GCCGGATACT ATGGCGGAGA GGTTGTACCG
TTATTCTCCA TCGGTGCATC CGCAGGTTTC GTACTGGCAA ATGTGTTGGG ATTGCCTATT
GAACTGTGTG TGGCTCTCGG ATATGCGGCA GTTTTCGGAA GTGCCACCAA TACATTTTTC
GCACCTCTGT TTATAAGTAC GGAAATCTTT GGAACTGAAT ACCTTCCCGT GTTTGCTGCA
GTATGTGCCA TAGCTTACAT GTTCAACGGA AACAATTCCA TCTACCCTCT TCAGATTCCT
CATGAGGCAA TAAGCAAAGT TCTGCCTTTA AGTGAAAAAA ACTTCGCCGG AAAAAAGATA
TTTAAAATCT TAAACCACCA ATACAAAGAC AGAAAGGTAT ATCATTAA
 
Protein sequence
MTFMKQSTTF YRNQFIMCIA AIPLGAVTGA ICAVFGLTLL KITDYRTNHY LYLLPFLGIA 
GVFITWCYNR FGNDSAKGMA LLFEIHQDKR SSIPLRLIPF AVGSTWLTHL FGGSAGREGV
ATQIGGTLGS YIGNKIRVSG ANKILMISGM AAGFSGLFHT PLAAVFFALE VLHCGVIEYS
ALLPSFVSAY TASCISEILG LQKSTYFLDC RIVPSFSFIM KIIVLGVLFG LTGMLFSILL
KKLRALLTNY IKNNIIRIFV FGTIIGIISI ICFQGRYSGP GTNLISACFS NDIMPWDFML
KILFTALTLA AGYYGGEVVP LFSIGASAGF VLANVLGLPI ELCVALGYAA VFGSATNTFF
APLFISTEIF GTEYLPVFAA VCAIAYMFNG NNSIYPLQIP HEAISKVLPL SEKNFAGKKI
FKILNHQYKD RKVYH