Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2176 |
Symbol | |
ID | 4810889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2591107 |
End bp | 2591985 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640107579 |
Product | abortive infection protein |
Protein accession | YP_001038571 |
Protein GI | 125974661 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.184478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGATT TACCTTCTGT TTTGCCAAAA TATATGAAAG CTTTATTAAA GTCTCTGGCT TTCATAATAC TGTATATATC CATATATTTT GCCGCACAGG TCGCCGTTAC GGTGTTCTAC TCCGCCATGA TCATAACCCA TATGATAATT ACCGGTCAGT CTATAGATTG GACTTCAGTA TACGACGTCA TACTTGTGAA TACCACAACC GCAGTACTTA TTTCAATATT ATTGACACTT CCCATATACT TTATTATCCC AAAAATCCAA AAGCAGAATT TTTTTGATGT ATTTAAGTTT AAGAAAACCG GGATTTCGAT TTTGGGTCTT AGTTTAATAC TGGGAACATC TTTAAACCGG TTTATTTCCC ATGCTTTTTC TTATCTTGAA CGGCTGACGC CTCTTGAAAA TGTAATGCAG GAACATCAGG AAACTATAGG AAGAATTATG GAGGGGAATT TTGTCATTGT TTTTATAACC GTGGGAATTA TGGCTCCGAT AATTGAGGAA ATCATTTTCC GCGGACTTGT GCTAAATGAA CTCAAAAAAG TCGTTCCCGC CTGTCCGGCA ATAATCCTTC AGGCCATAAT CTTCGGCATT TATCACATGA ATCCCTTGCA GGGAGTATAC GCCTCCCTAT TGGGAATCGT CCTTGGCATA GCGGCTGAAA AGACAGGATC AATATGGACG CCGATATTGA TTCATATTTC CTTTAACAGT ATAAGCACTC TGTTGAGCAA AATGCCGGTG GATATTCCGG AAAGCTATTT TCCGTCCAGT GAACATTTCG CGTTTGTTTC AAGTATTGTG TTCACGGCAC TGTCTTTTGC TTTGATACTG AGGCTCTCTT CACGACATCG CGACATCACC TCCGAATAG
|
Protein sequence | MRDLPSVLPK YMKALLKSLA FIILYISIYF AAQVAVTVFY SAMIITHMII TGQSIDWTSV YDVILVNTTT AVLISILLTL PIYFIIPKIQ KQNFFDVFKF KKTGISILGL SLILGTSLNR FISHAFSYLE RLTPLENVMQ EHQETIGRIM EGNFVIVFIT VGIMAPIIEE IIFRGLVLNE LKKVVPACPA IILQAIIFGI YHMNPLQGVY ASLLGIVLGI AAEKTGSIWT PILIHISFNS ISTLLSKMPV DIPESYFPSS EHFAFVSSIV FTALSFALIL RLSSRHRDIT SE
|
| |