Gene Cthe_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2176 
Symbol 
ID4810889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2591107 
End bp2591985 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content40% 
IMG OID640107579 
Productabortive infection protein 
Protein accessionYP_001038571 
Protein GI125974661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.184478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATT TACCTTCTGT TTTGCCAAAA TATATGAAAG CTTTATTAAA GTCTCTGGCT 
TTCATAATAC TGTATATATC CATATATTTT GCCGCACAGG TCGCCGTTAC GGTGTTCTAC
TCCGCCATGA TCATAACCCA TATGATAATT ACCGGTCAGT CTATAGATTG GACTTCAGTA
TACGACGTCA TACTTGTGAA TACCACAACC GCAGTACTTA TTTCAATATT ATTGACACTT
CCCATATACT TTATTATCCC AAAAATCCAA AAGCAGAATT TTTTTGATGT ATTTAAGTTT
AAGAAAACCG GGATTTCGAT TTTGGGTCTT AGTTTAATAC TGGGAACATC TTTAAACCGG
TTTATTTCCC ATGCTTTTTC TTATCTTGAA CGGCTGACGC CTCTTGAAAA TGTAATGCAG
GAACATCAGG AAACTATAGG AAGAATTATG GAGGGGAATT TTGTCATTGT TTTTATAACC
GTGGGAATTA TGGCTCCGAT AATTGAGGAA ATCATTTTCC GCGGACTTGT GCTAAATGAA
CTCAAAAAAG TCGTTCCCGC CTGTCCGGCA ATAATCCTTC AGGCCATAAT CTTCGGCATT
TATCACATGA ATCCCTTGCA GGGAGTATAC GCCTCCCTAT TGGGAATCGT CCTTGGCATA
GCGGCTGAAA AGACAGGATC AATATGGACG CCGATATTGA TTCATATTTC CTTTAACAGT
ATAAGCACTC TGTTGAGCAA AATGCCGGTG GATATTCCGG AAAGCTATTT TCCGTCCAGT
GAACATTTCG CGTTTGTTTC AAGTATTGTG TTCACGGCAC TGTCTTTTGC TTTGATACTG
AGGCTCTCTT CACGACATCG CGACATCACC TCCGAATAG
 
Protein sequence
MRDLPSVLPK YMKALLKSLA FIILYISIYF AAQVAVTVFY SAMIITHMII TGQSIDWTSV 
YDVILVNTTT AVLISILLTL PIYFIIPKIQ KQNFFDVFKF KKTGISILGL SLILGTSLNR
FISHAFSYLE RLTPLENVMQ EHQETIGRIM EGNFVIVFIT VGIMAPIIEE IIFRGLVLNE
LKKVVPACPA IILQAIIFGI YHMNPLQGVY ASLLGIVLGI AAEKTGSIWT PILIHISFNS
ISTLLSKMPV DIPESYFPSS EHFAFVSSIV FTALSFALIL RLSSRHRDIT SE