Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2162 |
Symbol | |
ID | 4810875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2572920 |
End bp | 2573636 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640107565 |
Product | peptidase C26 |
Protein accession | YP_001038557 |
Protein GI | 125974647 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000124945 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA ATGAACCTGT AATTGGAATA ACGCCCTCAT TTGACTACAA TGAGAATAAA ATGTATATTA ATAATATATA CTGTGAAGCC ATAATTCTGT CAGGAGGGAT GCCTGTTCTT TTGCCCGTTA CCGAGGATGA AGGTTTGTTG TCCCAAATGG TTGAAGAGTT TGACGGATTT TTGCTTTCGG GAGGACCGGA TGTGGATGCT GTGCATTGGG GAGAGTGGAA TTACAGTTAT AACGGAGAAA TTTCTCCCCA CCGTGACAAG ATGGAGCTTT TTATAGCAAA AGAAGCAGTG GCGAAAGACA AACCGATATT TGGAATTTGC AGAGGTATAC AGGTTTTGAA TGTGGCACTT GGAGGAACAC TGTACCAGGA TATATATTCC CAGAATAAAG AGAAGCGGCT GATTAAACAT TCACAAAACG CTCCAAGGTG GTATCCTGTA CATAAAGTCA TGCTTAAAGC GGGCTCCAAA GTAAGAAATG CCCACGGCGC TGAATCAATA GCCGTAAATT CCTTCCATCA TCAGGCTGTC AGAGAACCGG CTCCGGACTT TATTGTAACC GGCACAAGTG AAGACGGTAT AATTGAAGCA ATTGAACATA AAAATTGCAA ATTTGCCGTG GGAGTGCAGT GGCATCCGGA ACATATGTGG AAAAGAGATT TGTCTTTTTT AAATATTTTT AAATATTTTG TATCATCATG TCTGTAA
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Protein sequence | MGRNEPVIGI TPSFDYNENK MYINNIYCEA IILSGGMPVL LPVTEDEGLL SQMVEEFDGF LLSGGPDVDA VHWGEWNYSY NGEISPHRDK MELFIAKEAV AKDKPIFGIC RGIQVLNVAL GGTLYQDIYS QNKEKRLIKH SQNAPRWYPV HKVMLKAGSK VRNAHGAESI AVNSFHHQAV REPAPDFIVT GTSEDGIIEA IEHKNCKFAV GVQWHPEHMW KRDLSFLNIF KYFVSSCL
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