Gene Cthe_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2162 
Symbol 
ID4810875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2572920 
End bp2573636 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content41% 
IMG OID640107565 
Productpeptidase C26 
Protein accessionYP_001038557 
Protein GI125974647 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000124945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA ATGAACCTGT AATTGGAATA ACGCCCTCAT TTGACTACAA TGAGAATAAA 
ATGTATATTA ATAATATATA CTGTGAAGCC ATAATTCTGT CAGGAGGGAT GCCTGTTCTT
TTGCCCGTTA CCGAGGATGA AGGTTTGTTG TCCCAAATGG TTGAAGAGTT TGACGGATTT
TTGCTTTCGG GAGGACCGGA TGTGGATGCT GTGCATTGGG GAGAGTGGAA TTACAGTTAT
AACGGAGAAA TTTCTCCCCA CCGTGACAAG ATGGAGCTTT TTATAGCAAA AGAAGCAGTG
GCGAAAGACA AACCGATATT TGGAATTTGC AGAGGTATAC AGGTTTTGAA TGTGGCACTT
GGAGGAACAC TGTACCAGGA TATATATTCC CAGAATAAAG AGAAGCGGCT GATTAAACAT
TCACAAAACG CTCCAAGGTG GTATCCTGTA CATAAAGTCA TGCTTAAAGC GGGCTCCAAA
GTAAGAAATG CCCACGGCGC TGAATCAATA GCCGTAAATT CCTTCCATCA TCAGGCTGTC
AGAGAACCGG CTCCGGACTT TATTGTAACC GGCACAAGTG AAGACGGTAT AATTGAAGCA
ATTGAACATA AAAATTGCAA ATTTGCCGTG GGAGTGCAGT GGCATCCGGA ACATATGTGG
AAAAGAGATT TGTCTTTTTT AAATATTTTT AAATATTTTG TATCATCATG TCTGTAA
 
Protein sequence
MGRNEPVIGI TPSFDYNENK MYINNIYCEA IILSGGMPVL LPVTEDEGLL SQMVEEFDGF 
LLSGGPDVDA VHWGEWNYSY NGEISPHRDK MELFIAKEAV AKDKPIFGIC RGIQVLNVAL
GGTLYQDIYS QNKEKRLIKH SQNAPRWYPV HKVMLKAGSK VRNAHGAESI AVNSFHHQAV
REPAPDFIVT GTSEDGIIEA IEHKNCKFAV GVQWHPEHMW KRDLSFLNIF KYFVSSCL