Gene Cthe_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2155 
Symbol 
ID4811203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2562995 
End bp2564890 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content38% 
IMG OID640107559 
ProductS-layer-like domain-containing protein 
Protein accessionYP_001038551 
Protein GI125974641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG GTTCCGGTAC CTTGTCCGTT TCGATTAATG AGTATAGTTA TTCTGTCGGA 
AATAATGTGA GAATAGTGTG CTATAATGAC ATTGCTTTCG AAAAAGGGGA TGTATTTACG
GTTACCGTGC CGGCGTTCCG TTCAGATGAA TTTTCGGACG CGGCATTAAA TGGTTCTAAA
GTTGAATATT TGCTGGTTGA TAAAAAGGGA AATGTAATTG CTCCGGATAT TTCTCTTTCA
GGTGCTGACG CTGAAAATGC ATATTTTGAC ATTAATGTAT ACGGCGATGG TTACGGTTTT
GTTTTTGGAA GTGAAAGAAT AAGTTTGGGC GATTATGCTG AAATCACTGC CGTTCTTTAC
CAAGGATATG AATTTGAAGG TTGGTATGTG GAAGGTAAAA AAATATCATC GGAAGCTAAT
TATCGCTTCA GACCGGAAAA AGACATGGAT ATATATGCTA AATTTATGCC TAATGATATT
TTCACACAAA ATGTCAAGGT AAAGGTAAAA ACTGATAAAA ACAAATATGC TGTAGGTGAA
ACGGTAAAAG TAGATGGAAT TATAACAAAT ATGCATCCCA GCGAAACGAT GAAAGATGTT
CAGGTAATTA CTGTAGTTTA TGATGAAGTT GAACATAAAA GATGGGAAAA TAATAAATCC
GGTTTGACTT TGGCACAGGG CGAATCAAAA ATTGAGAGTG CTATCTGGTC AACAGAAAAT
GCAAAGCCGG GAAAGTATAA AGTTGAGGTC GCAGCTTATA TATCAAAAGG CAACACACCC
GTTTTTATTT TTGATGAAGT TGAATTTGAA ATAGTTGAAG AGAAAACAGC CCAAACAACA
CCTGATCCTA CCGTGACTTC GACTCCTGAA AATGACGAAG AGTCTGAAGA CAGTGAAGAA
AGACAGATGC AAAAAGACAT TTTTATCCTT GTGACTACGG ATAAGAGAAT ATATTCGGGA
AATGACGTGA TTACATATAA AGTTGAATAT TACAATTTAA CGGATTCACA AACCGGCGAA
TTTGAACTTT CCACCCAGGT TCCTACATAT ACGGAAGTAT TGGAAGCCGG TCGCGGAGTA
GTCGAAGGCA ATACAATAAA GTGGAAAATA TCGAATTTGA ATAAAAATGG GTCCGGTGAA
ATAACGTATA AAGTAAAGAT TAATGAGATA CCCAACTCTG AAGTAAAAAT AAAGAACAAA
TTTGAAGTAA AAGATGAAAA GCTGATTAAT CCTAAAAATG CATTATCAAC CATTGAAGGC
ATGGCCAGGA CGGGAAGGCA TGGAAACATA ATTCATAAAT CCTATATAAA TGGATATCCG
GATAATTCAT TCAAACCTGA CAATCACATA ACAAGAGCAG AAATAGCAAC CATATTGGCA
AATGTTATGG GACTTTCCGT TCCGGACAAT ATAGAAGAAA CAGGGTTCAA AGATGTGGAT
AAAAACCATT GGGCGGCAAG ATATATAAAA GCTGTAACCG ATGCCGGTAT TTTCAAAGGA
TATGAAGATT CAACTTTCAG ACCGAATGAG ACCATAAGCA GGGCGGAACT GGCAACGGTT
ATATTTAAGT GTCTGGACTT GGATGAGAAA AAGGCCGTAA AATCAAGCTT CACAGATACA
AAGGGACATT GGGCGTCGGA TTTCATTGAA GAAGTCAGCC GAAACAAGAT AATCAGAGGA
TATGAAGACG GAAGTTTTAA ACCAAACGGC AAGGTTACCC GGGCGGAAGC GGTTGTTATG
ATTAATAATA TGTTGTACAG AGACCCAATA AATGTAGACT CAAGTAAATT TACGGATTTG
GATAAGAAAC ATTGGGCCTT TGGACATATA GAGGCTGCGG CCGGAGATTA TGAGTTTAAA
ATAGATGAGG ACGGCGGCAA AGTACTTGTT AATTGA
 
Protein sequence
MAKGSGTLSV SINEYSYSVG NNVRIVCYND IAFEKGDVFT VTVPAFRSDE FSDAALNGSK 
VEYLLVDKKG NVIAPDISLS GADAENAYFD INVYGDGYGF VFGSERISLG DYAEITAVLY
QGYEFEGWYV EGKKISSEAN YRFRPEKDMD IYAKFMPNDI FTQNVKVKVK TDKNKYAVGE
TVKVDGIITN MHPSETMKDV QVITVVYDEV EHKRWENNKS GLTLAQGESK IESAIWSTEN
AKPGKYKVEV AAYISKGNTP VFIFDEVEFE IVEEKTAQTT PDPTVTSTPE NDEESEDSEE
RQMQKDIFIL VTTDKRIYSG NDVITYKVEY YNLTDSQTGE FELSTQVPTY TEVLEAGRGV
VEGNTIKWKI SNLNKNGSGE ITYKVKINEI PNSEVKIKNK FEVKDEKLIN PKNALSTIEG
MARTGRHGNI IHKSYINGYP DNSFKPDNHI TRAEIATILA NVMGLSVPDN IEETGFKDVD
KNHWAARYIK AVTDAGIFKG YEDSTFRPNE TISRAELATV IFKCLDLDEK KAVKSSFTDT
KGHWASDFIE EVSRNKIIRG YEDGSFKPNG KVTRAEAVVM INNMLYRDPI NVDSSKFTDL
DKKHWAFGHI EAAAGDYEFK IDEDGGKVLV N