Gene Cthe_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2105 
Symbol 
ID4810965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2500159 
End bp2501148 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content41% 
IMG OID640107512 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001038505 
Protein GI125974595 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000107011 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTTA ATTCGATTAT CGGCCAAAAA AGTGTTGTGG AAAGTTTAAA AAGATTTATA 
GACAACAACA GAATAGGACA TGCATATATA TTTTCTGGAC CGGAAGGAAT AGGCAAGAGT 
ACTGTTGCAA AGATTTTTGC ATCCATATTG ATGTGCGATG ATGCGGCAGT GGATAAAAGC 
TGCGGCAATT GCCGGTCCTG CCGCCTTTTT GAGAACAGGA CCAATCCCGA CTTTGGTGTG 
TTGGAAACCA GGGGCCTTAG CATAGGTGTC GATGAAATAA GAAATTTACA GCAGGATATA 
TGCATAAGAC CTCTCTATTC CAAAAGAAAA GTTTATTTGA TACGGGAAGC GGAGAAAATG 
ACCGTGCAGG CCCAGAACTG TCTTTTAAAA ACCCTTGAGG AACCTCCGGA ATATGCGGTT 
ATCATACTTG CAACGTCAAA TTATGAGTCT CTTCTGGAGA CCATACGTTC AAGAAGCGTA 
AGAATTAATT TTGCGAAAAA TACCTTTGAC GAGGTAAAAA GATTTATCGT GAGCAGGGCG 
GGAGGAGACT TTGAACAAGC GGATTTTATA GCTGCGTATG CCGACGGAGT AATTGGCAGG 
GCTGTTGAGC TTATGGAATC GGAAAGATTC AAGGAACTTC GGGAGAAGGC GATTGACGCG 
GCAGTCAGGC TTTCCGGGTC CGATTTTGAG GATATGTTGA ATATTTCCCG GATGTTTGAT 
GAGAACAAGG AGGACGTCGA TTCCATACTG GATGTTATAC TCCTGTTTTA CAGGGATTTG 
CTTATGGCCG GGAAATTTGG AAATGAAAAG TTGTTGATTA ATTCTGATAA AAAGGATATC 
ATATTAAAGT ACGCAGGTAG GTTTTCTGCT GGAAAATTAT TGAATAATAT AGAGATAATT 
GAAGAAACTC GCAGAAATAT AAAACAGAAC GCAAATTATC AGCTTGCTGT TGAGGTCATG 
CTTATGAAGC TTCAGGAGGA AAATGCATAA
 
Protein sequence
MDFNSIIGQK SVVESLKRFI DNNRIGHAYI FSGPEGIGKS TVAKIFASIL MCDDAAVDKS 
CGNCRSCRLF ENRTNPDFGV LETRGLSIGV DEIRNLQQDI CIRPLYSKRK VYLIREAEKM 
TVQAQNCLLK TLEEPPEYAV IILATSNYES LLETIRSRSV RINFAKNTFD EVKRFIVSRA 
GGDFEQADFI AAYADGVIGR AVELMESERF KELREKAIDA AVRLSGSDFE DMLNISRMFD 
ENKEDVDSIL DVILLFYRDL LMAGKFGNEK LLINSDKKDI ILKYAGRFSA GKLLNNIEII 
EETRRNIKQN ANYQLAVEVM LMKLQEENA