Gene Cthe_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2092 
Symbol 
ID4810952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2487918 
End bp2488772 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content41% 
IMG OID640107499 
Productdimethyladenosine transferase 
Protein accessionYP_001038492 
Protein GI125974582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase
[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000751415 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTAA ATACCAAAAA ACTTATCCAA AAATACAATT TGAAGCTGAC AAAATCTTTG 
GGACAAAATT TTCTTATCGA TGACAATATA GTTAAAAGGA TAGTTGACGT GGCGGAAATA
ACGGAAAAGG ACCTGGTAAT TGAAATTGGC CCGGGAGTGG GCAGTATGAC GGTGGAACTT
GCAAAAAGAG CCGGGAAGGT TGTTGCCGTT GAAATTGACA AGAGGCTCAT ACCGGCGTTG
GAAGACAACC TTGGAGAGTT TTCAAATGTG GACATTATTA ACAAGGACAT AATGGATGTG
AATATAAATG AATTTCGGGG CGAAAGCGGC AATGTCAAAG TGGTTGCCAA CCTTCCCTAT
TACATAACCA CTCCTATTAT TATGAAGCTT CTGGAAGAAA ATAATGATAA TATAGACATT
ATGGTTTTCA TGGTCCAAAA GGAAGTTGCC CAGAGGATGG TTGCCTCGCC GGGCAAAAAG
GATTATGGCG CCTTGTCCGT TGCCGTTCAA TATTATACGA AGCCGGAAAA GGCGTTTGAC
GTTCCGCCTC ATTGCTTTGT TCCGCAGCCC GAGGTGGATT CCACCGTAAT AAAACTGAAA
GTGAATGAAA CTCCGCCGGT AAAGCTCATG GACAAGGACT ATTTTTTCAC GGTGGTAAAG
GCTGCTTTCG GACAAAGAAG AAAAACTTTG GTAAACGCAC TGCATAATTT TAAGGCTTTA
GGCAAGTCAA AAGAAGAAAT CAAGGAAATA TTGAAAAAGC TTGGAATTGA CGAAAATGCC
AGGGGAGAAA CATTGTCAAT TACGCAGTTT GCAGAGCTTT CAAATTTGCT TTTCCGGTCT
TCACAAATAA TGTGA
 
Protein sequence
MGVNTKKLIQ KYNLKLTKSL GQNFLIDDNI VKRIVDVAEI TEKDLVIEIG PGVGSMTVEL 
AKRAGKVVAV EIDKRLIPAL EDNLGEFSNV DIINKDIMDV NINEFRGESG NVKVVANLPY
YITTPIIMKL LEENNDNIDI MVFMVQKEVA QRMVASPGKK DYGALSVAVQ YYTKPEKAFD
VPPHCFVPQP EVDSTVIKLK VNETPPVKLM DKDYFFTVVK AAFGQRRKTL VNALHNFKAL
GKSKEEIKEI LKKLGIDENA RGETLSITQF AELSNLLFRS SQIM