| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2081 |
|---|
| Symbol | |
|---|
| ID | 4810679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2473651 |
|---|
| End bp | 2475399 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640107488 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_001038481 |
|---|
| Protein GI | 125974571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00812611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCG CGAAAGATGA ATTTCTGCCG GCGGGCCTTG CGGTCAAAAT GGCGGAACTT
ACAGGGAAAA TCAACCGCGA AATAGCGGTG TATATAAACA GAAAAGGGAA TATAATTGAC
GTAAGTGTGG GAGACAGCAG CACCGTTTCA CTTCCGGAAG TGGAAGGAAG AAAGGATTTG
GCACGCCTTG TCGGGGTAAG ATGCATCCAT ACTCATCCCA ACGGTGAGGG AATGGTTTCA
CTGGTGGATT TAAATTCCCT GGTTAAGATG AGACTGGATG CCATGGTGGC AGTCGGAGTG
AAAGACGGGC GGATAACGGA AATATACGCG GCTTTGCCTG TGAGGGATGA AAACGGGAAT
TTGGGCAAAA CCACCGTGTA TGGACCCTTT GGCAAGGACG ACAAAAGAAT GAATAGGCTT
TGGGACATAA TACTTGAGAC GGACAAGCTT AAAAGTACGG TGGTGCACTT AAATGAGAGC
GATGAAGAAA GAGCCGTGCT GGTTGGGCTT GAGACTTCGT CAAAGGTCAT TGTGGGAGGA
AAAAGCGAAG GAGAAAGATC TTTGGACGAA CTGGAAGAGC TGGCCCGCAC TGCCGGAGCG
GTTGTTCTGG AAAAAATAAT ACAGAGAAGA CCTGCAAAAG ACCCGGCATT TTTTATCGGA
AGGGGAAAAG TTGAGGAACT TTCTCTTATA TGCCAGGCTC TTGACGCCAA TCTGATAATT
TTTGACGACG AGCTTTCGGG AGTCCAGATG AGGAATATTG AAGAGATGAC AGGAGTAAAG
GTTGTGGACA GGACCACTTT GATTTTGGAC ATATTTGCCA AAAGGGCGCG TTCCCGGGAG
GGAAAACTTC AAGTGGAACT GGCCCAGCTA AAATACAGGG TATCGAGGCT TGTGGGTCTT
GGGACCCAGC TTTCAAGGCT CGGAGGCGGT ATAGGAACAA GAGGTCCGGG TGAGAAAAAA
CTGGAGGTTG ACAGAAGGCA TATAAAGAGA AGAATAAGCT TCCTTGAAGC ACAACTTAAG
GATGTGGAAA AGAGAAGAAA TTCTTTCAGG GAAAGCCGGA CAAGGAACGC CATACCCACC
ATTGCGCTGG TGGGATATAC CAACGCGGGA AAATCCACTC TTATGAACAG GTTGTGCGAA
AGCAACGTCC TGGCAGAAGA CAAACTCTTT GCAACTCTTG ACCCCACGAC GAGAAGTTTT
AGACTTTCGG ACGGAAGGGA AGCGCTTCTC ATTGACACGG TGGGATTTAT AAGAAAGCTC
CCTCATGAGT TGGTGGAGGC GTTCAAGTCA ACTCTTGAAG AGGCAGTGTA TGCGGACATG
CTGATTCATG TGGTGGATGC TTCCAATGAG GAGGCGGAAG AACAAGTAAA GGTTGTGAAC
GATATCCTTG AAAGTCTCGG TGCGGCAAAC AAACCTGTTA TCATGGCACT CAACAAGATG
GATATGGTAA AGGGCGGCCT GAGGCTTGCA ATATCCAATC CGAACGGCAG GATATTTGAA
ATATCTGCCG TTACAGGACA GGGAATAGAT GCCATGCTCG AAGGCATCAG GGAAATGCTG
CCCGAGGATG AAAAGGAGGT AAGACTTTTT ATACCTTACA GTGACGGATG GGTCATATCC
TATATTTATC AAAACGGAAG AATACTTGAG CAAGTTCACG GCGAGTCGGG GACCGAAGTA
AAAGCTTTGA TAAAAAAACA CAGACTGAAA CCTGTCAGGG CATATATTTG TGGGAAATAC
CCTGTCTGA
|
|---|
| Protein sequence | MQGAKDEFLP AGLAVKMAEL TGKINREIAV YINRKGNIID VSVGDSSTVS LPEVEGRKDL
ARLVGVRCIH THPNGEGMVS LVDLNSLVKM RLDAMVAVGV KDGRITEIYA ALPVRDENGN
LGKTTVYGPF GKDDKRMNRL WDIILETDKL KSTVVHLNES DEERAVLVGL ETSSKVIVGG
KSEGERSLDE LEELARTAGA VVLEKIIQRR PAKDPAFFIG RGKVEELSLI CQALDANLII
FDDELSGVQM RNIEEMTGVK VVDRTTLILD IFAKRARSRE GKLQVELAQL KYRVSRLVGL
GTQLSRLGGG IGTRGPGEKK LEVDRRHIKR RISFLEAQLK DVEKRRNSFR ESRTRNAIPT
IALVGYTNAG KSTLMNRLCE SNVLAEDKLF ATLDPTTRSF RLSDGREALL IDTVGFIRKL
PHELVEAFKS TLEEAVYADM LIHVVDASNE EAEEQVKVVN DILESLGAAN KPVIMALNKM
DMVKGGLRLA ISNPNGRIFE ISAVTGQGID AMLEGIREML PEDEKEVRLF IPYSDGWVIS
YIYQNGRILE QVHGESGTEV KALIKKHRLK PVRAYICGKY PV
|
|---|
| |