| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2078 |
|---|
| Symbol | |
|---|
| ID | 4810676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2471341 |
|---|
| End bp | 2472000 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640107485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038478 |
|---|
| Protein GI | 125974568 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1739] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAA AGGAATATAA AACAGTGTTA AATCATGTGG TGTATGAGAT AGAAGAGAAA
AAATCCAGAT TTATAGCGTC GGTCAGGCCG GTATCAACCG AAGAGGAAGC GGTTGAGTTT
ATTGAGGAAT TGAAATCAAA GTACTGGGAT GCCACACATA ATGTTTACGC CTACTATATT
GGTGGAAAGA ATATTATACA GAAGTTCAGC GATGACGGAG AACCGTCGGG GACTGCCGGA
CTTCCCGTAC TTGAAGTCAT AAAGAGAATG GGGCTTCGGG ATGTGGCGGT TGTTGTAACA
AGATATTTTG GAGGTACTTT ACTTGGAGCT GCGGGACTTA TACGGGCATA CAGCAAAAGT
GCCTCAATGG GGATAGAGGC AGCCCAAATT GTGACAAAAA AGCTTTGCAC CCAGGTAAAT
ATAATTCTGG AGTACACTTT GTTTGGAAAG GTTCAGAACA TCCTTATTTC GAAGGGATTT
ACAATAAAAG ATGTTATATA TGAGCAGGAT GTGGAGATAA TAGTATTTGT TCCGAAAGAT
GAAGTTGACG CCTTTATTGA CATGATTAAT GAGGCGACAA ACGCAAGAGT AATTGTTCAG
AAGGGAGACA GTTGCTATAT CACGTTGGAC TCTCAAGGGA AAATTGTAGC GGACCGGTAG
|
|---|
| Protein sequence | MLEKEYKTVL NHVVYEIEEK KSRFIASVRP VSTEEEAVEF IEELKSKYWD ATHNVYAYYI
GGKNIIQKFS DDGEPSGTAG LPVLEVIKRM GLRDVAVVVT RYFGGTLLGA AGLIRAYSKS
ASMGIEAAQI VTKKLCTQVN IILEYTLFGK VQNILISKGF TIKDVIYEQD VEIIVFVPKD
EVDAFIDMIN EATNARVIVQ KGDSCYITLD SQGKIVADR
|
|---|
| |