Gene Cthe_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2073 
Symbol 
ID4810671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2466588 
End bp2467769 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content45% 
IMG OID640107480 
Productamidohydrolase 
Protein accessionYP_001038473 
Protein GI125974563 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTACTT TGGAAATAAA AGAAAAATGT TCTGAAATAA TGGATGAGGT CATCCGCATA 
AGAAGGGACA TTCACAAAAA TCCTGAACTG GGCTTTAATG AATACAGGAC ATCCTCCATC
GCATCGGATT TTATGAAAAA CCTCGGTTTC AGTGTCCGCA CAAACGTAGC CAAAACAGGT
GTTGTCGGCG TCCTTGAAGG TGAAAGACCC GGTAAGACAA TTGCAATAAG AGCCGACATG
GATGCCATCC CCATAGCCGA GGAAAACGAT TTTGAATATG CATCCCAAAA TAAAAATGTC
ATGCATGCCT GCGGGCACGA TGCCCACATC GCCATAGCGC TGGGAACTGC AAAGATACTT
TATCATTTTA AAGACAGAAT ATCCGGCAAT GTCAAATTTA TTTTCCAGCC TGCGGAGGAA
GGGCTGGGAG GAGCCTCTTT TATGATTGAA GAAGGGGCGT TGGACAATCC CGCAACCGAT
GCCATAATCG CCCTTCATGT CTCCCCGCTT TTAAAGTCGG GTCAAATTTC AGTCGGCGCA
GGACCGGTAA TGGCTTCGCC CGCCGAGTTC GACATAGTCA TAAAAGGCAG GGGTGGTCAT
GCGGCCCAGC CCAACAAATG CGTTAATCCA ATATCCATAG GGGCAAATAT TATAAACATG
TTTTCATCCA TTATTCCAAA AACCCTGAGT CCTTTTAAAA GCGCCGTTCT GTCGGTTACA
TGCTTTGAAG CGGGCAACAC CTACAACGTT ATTCCCTCAC AGGCTGTCAT CAAAGGCACC
GTCAGGGCTT TCGACCGGGA AACCCACAAT GTAATATACA ATAAAATGTA TTCTGTAATC
GCCTCATTAA CGTCGGCGGA GGGAGCGGAC TTCTCTTTTG ACTACAACCT CGGCTATCCT
CCTGTCGTAA ACAATGCAGA AATTGCAAAG CTTGTTGCAA ATGCCGCGAA AAAAATTGTA
GGGGACGACA ACGTAGTGGA AAATCCGGAG CCTTCCATGC TTGCGGAAGA TTTTTCCTAC
TACGCTTTAA AAATCCCGGG GGCAATTTTC AACTTAGGCT GCAGACACCC TCACGATGAA
AATTTTTACA ACCTTCACTC CTCCAAATTC AACCTTGACG AAAGCTGCAT AATCACAGGA
ATACAGATAT TATCCCAGTG CGTACTGGAT TTTCTGGGAT AA
 
Protein sequence
MCTLEIKEKC SEIMDEVIRI RRDIHKNPEL GFNEYRTSSI ASDFMKNLGF SVRTNVAKTG 
VVGVLEGERP GKTIAIRADM DAIPIAEEND FEYASQNKNV MHACGHDAHI AIALGTAKIL
YHFKDRISGN VKFIFQPAEE GLGGASFMIE EGALDNPATD AIIALHVSPL LKSGQISVGA
GPVMASPAEF DIVIKGRGGH AAQPNKCVNP ISIGANIINM FSSIIPKTLS PFKSAVLSVT
CFEAGNTYNV IPSQAVIKGT VRAFDRETHN VIYNKMYSVI ASLTSAEGAD FSFDYNLGYP
PVVNNAEIAK LVANAAKKIV GDDNVVENPE PSMLAEDFSY YALKIPGAIF NLGCRHPHDE
NFYNLHSSKF NLDESCIITG IQILSQCVLD FLG