Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2059 |
Symbol | |
ID | 4810657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2450391 |
End bp | 2451035 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640107466 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_001038459 |
Protein GI | 125974549 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.116438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTCAA ATGCACAAAT TGATTCAGTA AAATGCTTTA GTACCATGAA CGATGAAGAA ATAGTTGAAG ATAGCCGCGC CGGTGATGAC AGGGCCCTCG AATATTTAAT CAACAAGTAT AAAGGTTTTG TTCGTGCAAA GGCCAGAACT TATTTCCTTA TTGGAGCCGA TCGGGAAGAC ATCATTCAGG AGGGAATGAT TGGCCTTTAC AAAGCCATAA GGGATTTCAG GAAGGACAAG CTTTCTTCCT TCCGCGCTTT TGCCGAGCTC TGTATAACAA GGCAGATTAT AACCGCCATA AAGACTGCCA CCCGGCAAAA ACACATACCT TTAAATTCCT ATGTCTCCCT TAACAAGCCT ATTTTCGACG AGGAGTCGGA TCGTACCCTC ATGGACATTA TCAGCGAGGA GAGCATAAAC GATCCGGAGG AAATGGTTAT AAACAGGGAA GAGTTTTCGG GAATTGAGGC TAAGATGGGA GAAATTTTAA GCAGTCTGGA ATGCGAAGTT CTGACTTCGT ATTTGCAAGG CAAGTCCTAT CAGGAAATTG CGGTTGAATT GGACAGGCAT GTGAAGTCGA TAGACAATGC GCTACAGAGA GTAAAACGTA AGTTGGAAAA ATATCTTGAA GAATCAAGGA TATAA
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Protein sequence | MKSNAQIDSV KCFSTMNDEE IVEDSRAGDD RALEYLINKY KGFVRAKART YFLIGADRED IIQEGMIGLY KAIRDFRKDK LSSFRAFAEL CITRQIITAI KTATRQKHIP LNSYVSLNKP IFDEESDRTL MDIISEESIN DPEEMVINRE EFSGIEAKMG EILSSLECEV LTSYLQGKSY QEIAVELDRH VKSIDNALQR VKRKLEKYLE ESRI
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