| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1986 |
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| Symbol | |
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| ID | 4810918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2366420 |
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| End bp | 2368573 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640107402 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001038397 |
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| Protein GI | 125974487 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAATGA TGGACGCAGC ATTAAAATAT GCAGAAGCCA ATATCCCGGT TATACCTCTG
CATTGGATTT GTGAGGATGG CTCATGCTCC TGCAAGGTAG GGAGTAATTG CGACAGCAAG
GGAAAGCATC CGTTATATAC CGGCTGGTAC AAGAATTCTA CTGCTGATAT TGAGCAAATA
AAGAAATGGT GGACGAAAAC ACCCAATGCC AATATCGGTA TTCCTACAGG TGAGAAATCC
GGCTGGCTGG TGCTTGATGT GGACGATGGC GGCAATGAAA CTCTATCGGC TCTTGAAGCA
ACACATGGAA AACTTCCGGA TACGGTTACT GCTGTTACAG GAAGTGGCGG TCGGCACTAT
GTCTTCAAAT ACCCACAAGG CAGGAGCATT CCTAATAAGA CCAAGTTTGT ACCGGGACTT
GATACCCGTT CAACAGGTGG TCTGATTGTC GCAGCTCCAA GCATTCATGT AAGCGGTAAT
CGGTATGAAT GGATAAAGGA TCATTCTCCC TTTGACAGAA CCCCGGCAGA AGCTCCGGAG
TGGCTGTTAA AGCTTATGGA AAGGGAGGAA GTATTGCTTA CACCCTTTGA AGGTAGCAGT
ATTACAGCCG AGATTATGGA AGGCAGTCGG AACAGTACCC TGACAAGCCT TGCAGGAACC
ATGAGGGCAA GAGGAATGAC AGAAGAGGGC ATCTATGCAG CGCTGCTTGC CGAAAACAAC
GCAAGGTGCA ATCCTCCGCT TGATGAAGCG GAAGTTAGAA ATATAGTGCA CAGTGTCAGC
CGATACCAGC CAAATCCTCC GATGAAGAAA CATTACCACA GGACAGACAG CGGTAATGCA
GAAAGGCTGC GTGACCGGTT TGGTTCAATC ATAAGGTATT GTCCGGCTTT TAAATACTGG
TTGGTATATG ACGGCTGTTG CTGGAGGAAA GAAACCGGAG AACTTATGCA GTTTGCTATA
AAAACAGCAA GAGACATGCT CGCAGAAGCA AGCCAGATAG AGGATGAAGC TACAAGAAAA
GAACTGGTGC ACCATGCCAT GCAGTCTGAG AACGCAGGCA GGCTTAAAGC CATGATCGAT
GTGGCTTCAA ACCTTGAAGG CCTGATAATC ATGCCAGATG AGCTTGATTC TGATATATGG
AAGCTGAACT GTAAAAATGG TGTTGTAGAT TTAAAGACAG GGGAACTTCT ACCCCATAAG
CGTGAGTACT ATATGAGCAA AATCTGTCCT GTTGAATATA GCCCAGAAAG CAAGGCTCCC
AGATGGATTG AGTTTCTGAA TACCATTACG GGAGGAAGCA ACGAGCTTGT AAGATACCTT
CAAAAGGCTG TGGGCTCATC TTTAAGCGGG GATATTTCAG AGCAGGCCTT ATTCGTCCTC
TATGGAACAG GAGCAAATGG CAAGAGCACA TTTCTAAACA CCATCTCCGA CCTGTTGGGA
GATTATGCAA GAAACACTCC ATCCGAAACC TTTATGGCAA AAAGGATAGA AGCGATAGGA
AATGATATTG CGAGATTACA GGGAGCAAGG CTTGTAACTG CCATAGAAAT AAATGAGGGA
CAAAGGCTCT CTGAGGCATT GATTAAGAGC TTTACAGGCG GAGACAGAAT CACAGCAAGG
TTCCTTTATG GAGAATACTT TGATTTCCAG CCACAGTTCA CCCCGTTTCT CGTAGTAAAC
CACAGACCAG TCATAAGAGA TACCAGCCAC AGCATTTGGA GGCGCATTAA GCTGATTCCT
TTCACCGTTA CCATACCCGA GGATAAAAAG GATAAGCAGC TACCGGCAAA GCTGAGAGAA
GAGCTGCCTG GCATATTGTC ATGGGCAGTA GAGGGTTGCC TTCTTTGGCA GAAGGAAGGA
CTTGAAATGC CTGATGAAGT CAAAGAAGCT ACAGAAGGTT ACCGGGAGGA AATGGATACC
TTCTCAAGTT TTATAGAGGA ATGCTGCATT GTGGAGGAGG GCAGGAAAGT CTCCAATAGA
AGCATCAGGT ATGCTTACGA AACATGGTGC CGGGAAAATG GAGACTACCC TCTTGGACAA
AAGCTATTCA ATGCAAAAAT GACGGAGCGC GGCTTTGCTG TCAAACGCAG CGGAGCCAAT
GGCAGCAGGG ACTGGCATGG CATTGGTCTT GCGGATGAGG GGATACTTTT GTGA
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| Protein sequence | MTMMDAALKY AEANIPVIPL HWICEDGSCS CKVGSNCDSK GKHPLYTGWY KNSTADIEQI
KKWWTKTPNA NIGIPTGEKS GWLVLDVDDG GNETLSALEA THGKLPDTVT AVTGSGGRHY
VFKYPQGRSI PNKTKFVPGL DTRSTGGLIV AAPSIHVSGN RYEWIKDHSP FDRTPAEAPE
WLLKLMEREE VLLTPFEGSS ITAEIMEGSR NSTLTSLAGT MRARGMTEEG IYAALLAENN
ARCNPPLDEA EVRNIVHSVS RYQPNPPMKK HYHRTDSGNA ERLRDRFGSI IRYCPAFKYW
LVYDGCCWRK ETGELMQFAI KTARDMLAEA SQIEDEATRK ELVHHAMQSE NAGRLKAMID
VASNLEGLII MPDELDSDIW KLNCKNGVVD LKTGELLPHK REYYMSKICP VEYSPESKAP
RWIEFLNTIT GGSNELVRYL QKAVGSSLSG DISEQALFVL YGTGANGKST FLNTISDLLG
DYARNTPSET FMAKRIEAIG NDIARLQGAR LVTAIEINEG QRLSEALIKS FTGGDRITAR
FLYGEYFDFQ PQFTPFLVVN HRPVIRDTSH SIWRRIKLIP FTVTIPEDKK DKQLPAKLRE
ELPGILSWAV EGCLLWQKEG LEMPDEVKEA TEGYREEMDT FSSFIEECCI VEEGRKVSNR
SIRYAYETWC RENGDYPLGQ KLFNAKMTER GFAVKRSGAN GSRDWHGIGL ADEGILL
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