| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1985 |
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| Symbol | |
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| ID | 4810917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2364837 |
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| End bp | 2366108 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640107401 |
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| Product | phage major capsid protein, HK97 |
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| Protein accession | YP_001038396 |
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| Protein GI | 125974486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAGAAAG CAGAAGCTAT TTTAAACGAA GCGGAAAAAG CGGGTGGAAG TTTGACAAAG
GAACAGGAGC GACAGTTTAA TCGCTACACA GACAAAATAA AGAGCATTAA TGAAAGCATT
GACGAGGAAT TATTAAATAT CAGAACCTCT GAGCCAATAC TGAATATGCC ACAAAAAGCT
GTATTTCCTA TTGAAGAATC AAAAACTCCT GTAACAAAAG CCGTATCCAA ATCATTCAGA
GGGATGTTCT ATGGCAATGA AACAGTAAAA CTCAGCAACA ATGGATTTCA TTCCATGGAT
GAATTCCTGA GAACACTTCA CTCAGGCAGA GCCGACAACA GGCTAATAAA TGCCAGTATG
GTGGAAGGAA TACCCGAATT CGGCGGATAT TCCGTACCGG AGGAATACGG AGCCTTCCTG
ATGGATAAAT CCCTGGAGAA TGAAATCATC CGTCCCAGAG CAACAGTATG GGCAATGGGA
AGCGAAACAA AGAAAGTACC AGCCTTCGAT GGAGCAGACA GAACCAATCA CCTATTCGGT
GGTATTTCAG GAGAATGGCT GGAGGAAGGT CAGACAGGCA CACGAAAGAC CGCCAAGCTA
AGACTGATCC AATTAAAGGC CAAGAAGCTT GCCTGCTTCT CACAGGCATC CAATGAACTC
ATTGCAGATG GTATGTCCTT TGAAGAAATG CTTGCCGGAG CGCTTATTAA AGGCTTGGGC
TGGTACATGG ACTATGCCTT TATCAATGGA ACCGGTGAAG GTCAGCCTCT TGGTATTATA
AATGACCCGG CGCTGATTAC TGTAGATAAA GAGGACTCTC AAGCAGCAGC CACAATTACC
TATCAAAACG TGGTCAATAT GTTTTCAAGG CTTGCTCCGT CCTGTTTTAC CAATGCGGTA
TGGCTTGCCA ATCCATCGGT AATACCACAA TTGCTTACCA TGACTATCAC CATTGGTACC
GGTGGCGCTC AGATACCGGT GTTCAGGGAA GAGAGCGGGA AATTCACGCT TCTGGGTAAG
GAGGTCTTAT TCACTGAGAA ATGCCCCGCA TTGGGTGCTA AGGGAGATTT AATCCTCGCA
GACCTTAGCC AGTATGCCAT AGGCATGAGG AAAGAGATCG CTCTTGACCG CTCCAATGTC
CCAGGCTGGA TGGAGGATAT GACCGACTAC AGGGTGATAG TGCGTGTAGA TGGTCAGGGA
ACCTGGGATA AACCTATAAC ACCGAAAAAC GGAGCAACGC TCTCATGGGC AGTGGCTTTG
GAGGCAAGAT AG
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| Protein sequence | MEKAEAILNE AEKAGGSLTK EQERQFNRYT DKIKSINESI DEELLNIRTS EPILNMPQKA
VFPIEESKTP VTKAVSKSFR GMFYGNETVK LSNNGFHSMD EFLRTLHSGR ADNRLINASM
VEGIPEFGGY SVPEEYGAFL MDKSLENEII RPRATVWAMG SETKKVPAFD GADRTNHLFG
GISGEWLEEG QTGTRKTAKL RLIQLKAKKL ACFSQASNEL IADGMSFEEM LAGALIKGLG
WYMDYAFING TGEGQPLGII NDPALITVDK EDSQAAATIT YQNVVNMFSR LAPSCFTNAV
WLANPSVIPQ LLTMTITIGT GGAQIPVFRE ESGKFTLLGK EVLFTEKCPA LGAKGDLILA
DLSQYAIGMR KEIALDRSNV PGWMEDMTDY RVIVRVDGQG TWDKPITPKN GATLSWAVAL
EAR
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