Gene Cthe_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1980 
Symbol 
ID4810912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2360355 
End bp2361155 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID640107396 
Producthypothetical protein 
Protein accessionYP_001038391 
Protein GI125974481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.212888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGA TGGACGCAGC AATAAAATAC GCAGAAGCCA ATATCCCGGT TATACCTCTG 
CACTGGATTT GTGAGGATGG CTCCTGCTCC TGCAAGGCAG GGAAAAATTG CGACAGCAAG
GGAAAGCATC CGTTATATAC CGGCTGGTAC AATAATTCCA CTACTGATGT TGAGCAAATA
AAGAAATGGT GGACGAAAAC ACCCAATGCC AATATAGGCA TTCCTACAGG TGCGAAATCC
GGCTGGCTGG TGCTTGATGT GGACGATGGC GGTGATGAAA CTCTATCGGC TCTTGAAGCA
ACACATGGAA AACTTCCTGA TACGGTTACC GCTGTTACCG GAGGTGGCGG TCTGCACTAT
ATCTTCAAAT ACTCACAAGG CAGGAGTATT CCAAATAAGA CCAAGTTTGC ATTGGGTCTT
GATACGCGTT CAACAGGTGG TCTGATTGTC GTGGCTCCAA GCATTCATGT AAGTGGTAAT
CGGTATGAAT GGATAAAGGA TCATTCTCCC TTTGACAGAA CCCCGGCAGA AGCTCCAGCA
TGGTTATTAA AGCTCATGGA AAGGGAGGAA GTATTGCTTA CACCCTTTGA AGGTAGAAGT
ATTGTAGCAG GGATTAAGGA AGGCAGCCGA AACAGCACCC TGACAAGCCT TGCAGGAACC
ATGAGAGCAA GAGGAATGAC GGAGGAAGGC ATCTATACGG CATTACTTGC AGAAAACAAC
GCAAGGTGCA ATCCTCCGCT TGATGAAGCG GAAATTAAGA AAATATATAG TTTAGGTTTT
CAAAGAGTTA GTAGCTTGTA A
 
Protein sequence
MTMMDAAIKY AEANIPVIPL HWICEDGSCS CKAGKNCDSK GKHPLYTGWY NNSTTDVEQI 
KKWWTKTPNA NIGIPTGAKS GWLVLDVDDG GDETLSALEA THGKLPDTVT AVTGGGGLHY
IFKYSQGRSI PNKTKFALGL DTRSTGGLIV VAPSIHVSGN RYEWIKDHSP FDRTPAEAPA
WLLKLMEREE VLLTPFEGRS IVAGIKEGSR NSTLTSLAGT MRARGMTEEG IYTALLAENN
ARCNPPLDEA EIKKIYSLGF QRVSSL