Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1980 |
Symbol | |
ID | 4810912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2360355 |
End bp | 2361155 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640107396 |
Product | hypothetical protein |
Protein accession | YP_001038391 |
Protein GI | 125974481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.212888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATGA TGGACGCAGC AATAAAATAC GCAGAAGCCA ATATCCCGGT TATACCTCTG CACTGGATTT GTGAGGATGG CTCCTGCTCC TGCAAGGCAG GGAAAAATTG CGACAGCAAG GGAAAGCATC CGTTATATAC CGGCTGGTAC AATAATTCCA CTACTGATGT TGAGCAAATA AAGAAATGGT GGACGAAAAC ACCCAATGCC AATATAGGCA TTCCTACAGG TGCGAAATCC GGCTGGCTGG TGCTTGATGT GGACGATGGC GGTGATGAAA CTCTATCGGC TCTTGAAGCA ACACATGGAA AACTTCCTGA TACGGTTACC GCTGTTACCG GAGGTGGCGG TCTGCACTAT ATCTTCAAAT ACTCACAAGG CAGGAGTATT CCAAATAAGA CCAAGTTTGC ATTGGGTCTT GATACGCGTT CAACAGGTGG TCTGATTGTC GTGGCTCCAA GCATTCATGT AAGTGGTAAT CGGTATGAAT GGATAAAGGA TCATTCTCCC TTTGACAGAA CCCCGGCAGA AGCTCCAGCA TGGTTATTAA AGCTCATGGA AAGGGAGGAA GTATTGCTTA CACCCTTTGA AGGTAGAAGT ATTGTAGCAG GGATTAAGGA AGGCAGCCGA AACAGCACCC TGACAAGCCT TGCAGGAACC ATGAGAGCAA GAGGAATGAC GGAGGAAGGC ATCTATACGG CATTACTTGC AGAAAACAAC GCAAGGTGCA ATCCTCCGCT TGATGAAGCG GAAATTAAGA AAATATATAG TTTAGGTTTT CAAAGAGTTA GTAGCTTGTA A
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Protein sequence | MTMMDAAIKY AEANIPVIPL HWICEDGSCS CKAGKNCDSK GKHPLYTGWY NNSTTDVEQI KKWWTKTPNA NIGIPTGAKS GWLVLDVDDG GDETLSALEA THGKLPDTVT AVTGGGGLHY IFKYSQGRSI PNKTKFALGL DTRSTGGLIV VAPSIHVSGN RYEWIKDHSP FDRTPAEAPA WLLKLMEREE VLLTPFEGRS IVAGIKEGSR NSTLTSLAGT MRARGMTEEG IYTALLAENN ARCNPPLDEA EIKKIYSLGF QRVSSL
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