Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1944 |
Symbol | |
ID | 4810727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2319600 |
End bp | 2320148 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640107360 |
Product | hypothetical protein |
Protein accession | YP_001038355 |
Protein GI | 125974445 |
COG category | [S] Function unknown |
COG ID | [COG1978] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000382058 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCGA ACGTTGCCGT AGAATTCGAT GAAAACAGTA TTTTCCGAAG TTTGGGCAAG GGCAACCTTA CTTTCAGGGA GGCTTTTGAA GAAATTATAA AGTTTATCGA GGCAGACACC AACAGTTCTT ATAGAATTTC CATAGGAACT GATTCCCATG TGGGCAACGG TACTCTTTTT GTCACATGCA TTCATGTTCA CAGGATTGGA AAAGGGGCTA TCGGATTTCT TCACAAAAGT CTGATGTCAA GGCCTATAAG GAATTTACGG GAGAAAATTT ACATGGAAAC ATGTATGAGC CTCCAGCTGG CATATTTGTT TGACGAGGAA AAGATTGACC GTATATACAA AGCTTTGGGG AAAAACGGGA AATCTCCCAC CAAAGGTGTG ACTTTTGAAT TTCATATTGA CATAGGAAAA AGAGGAGAGA CAAAAGCACT TATAAACGAA ATGGTGGGCA TGGTAAGCGG ACTTAACTTC ATCCCTAAAA TAAAGCCGGA CAGCTATTGT GCCAGTTGCT TTGCGGACAG GTACACCAAA GCCATATAA
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Protein sequence | MLPNVAVEFD ENSIFRSLGK GNLTFREAFE EIIKFIEADT NSSYRISIGT DSHVGNGTLF VTCIHVHRIG KGAIGFLHKS LMSRPIRNLR EKIYMETCMS LQLAYLFDEE KIDRIYKALG KNGKSPTKGV TFEFHIDIGK RGETKALINE MVGMVSGLNF IPKIKPDSYC ASCFADRYTK AI
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