Gene Cthe_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1944 
Symbol 
ID4810727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2319600 
End bp2320148 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID640107360 
Producthypothetical protein 
Protein accessionYP_001038355 
Protein GI125974445 
COG category[S] Function unknown 
COG ID[COG1978] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000382058 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGA ACGTTGCCGT AGAATTCGAT GAAAACAGTA TTTTCCGAAG TTTGGGCAAG 
GGCAACCTTA CTTTCAGGGA GGCTTTTGAA GAAATTATAA AGTTTATCGA GGCAGACACC
AACAGTTCTT ATAGAATTTC CATAGGAACT GATTCCCATG TGGGCAACGG TACTCTTTTT
GTCACATGCA TTCATGTTCA CAGGATTGGA AAAGGGGCTA TCGGATTTCT TCACAAAAGT
CTGATGTCAA GGCCTATAAG GAATTTACGG GAGAAAATTT ACATGGAAAC ATGTATGAGC
CTCCAGCTGG CATATTTGTT TGACGAGGAA AAGATTGACC GTATATACAA AGCTTTGGGG
AAAAACGGGA AATCTCCCAC CAAAGGTGTG ACTTTTGAAT TTCATATTGA CATAGGAAAA
AGAGGAGAGA CAAAAGCACT TATAAACGAA ATGGTGGGCA TGGTAAGCGG ACTTAACTTC
ATCCCTAAAA TAAAGCCGGA CAGCTATTGT GCCAGTTGCT TTGCGGACAG GTACACCAAA
GCCATATAA
 
Protein sequence
MLPNVAVEFD ENSIFRSLGK GNLTFREAFE EIIKFIEADT NSSYRISIGT DSHVGNGTLF 
VTCIHVHRIG KGAIGFLHKS LMSRPIRNLR EKIYMETCMS LQLAYLFDEE KIDRIYKALG
KNGKSPTKGV TFEFHIDIGK RGETKALINE MVGMVSGLNF IPKIKPDSYC ASCFADRYTK
AI