| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1938 |
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| Symbol | ddl |
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| ID | 4810796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2313294 |
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| End bp | 2314424 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640107354 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001038349 |
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| Protein GI | 125974439 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00320777 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGATA AAAAAAGAGT ACTGGTTATT TTTGGCGGAC AATCGTCGGA ACACGAAGTT
TCAAGAATAT CGGCAACATC CATACTGAAG AACATTAATT TGGATAAATT CGATGTTTCA
ATGATAGGAA TCACAAAAGA CGGAAAGTGG CTTTATTATG ACGGGCCTAT TGATAAAATT
CCTTCCGGAG AGTGGGAGGA AATCGCACTG AAAGATGGGA CAAGAAGTAT TGCCGACAGA
GTGAGCCTGT TCGACAACAT AATAAGTTGC AAAAATAACG CATGCGGCCT TGAAAAGGCC
TCAGAGAACG AAAAAAGCAA AAAGATAGAT GTGGTTTTTC CGGTTCTGCA CGGCTGCAAC
GGTGAAGACG GGACCATCCA GGGACTTTTT GAACTGGCGG GCATTCCTTA TGTGGGCTGC
GGTGTGCTGG CTTCAGCAGT CGGAATGGAT AAGATTTATG CAAAGATAAT TTTTGAAAAA
GCCGGAATAC CCCAGGCGGA TTATCTGTAT TTCACAAGAA AAGAAATTTA CGGGGATGTT
GAGGGTGTGG TTGACAAAAT AGAGGAGAAA TTTTCATATC CTGTATTTGT AAAACCGTCC
AATGCCGGTT CTTCCGTAGG TGTGTCAAAG GCGCATGATA AAAATGAGCT TAAAGAGGCA
TTGATTTATG CCGCCAGGTA TGATAGAAAA GTACTGATTG AGGAATTTAT CAACGGAAGA
GAAGTTGAGT GTGCCGTGCT GGGGAATGAT GATCCTGTGG CATCAACGGT GGGAGAAATC
ATTCCGGGAA ATGAATTTTA CGACTACAAG GCAAAATACA TTGAAAATAC TTCCAAAATA
AAAATTCCCG CGGATCTTCC AGAAGAGACC GTGGAACAAA TAAGAAATTA TGCAGTAAAG
GCATTCAAGG CTTTGGATTG TTCGGGACTT GCAAGAGTTG ACTTTTTTGT GCACAAGGAA
ACCGGAAAAG TTTATATAAA TGAAATTAAT ACAATGCCGG GATTTACAAG TATAAGCATG
TATCCCATGC TTTGGGAGGA ATCCGGCATT TCCTATCCGG AACTTATTGA AAAGCTGATT
GACTTGGCTG TTCAAAGATA CAATGACAAT CTCAAAGAAT ATGATGAGTA G
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| Protein sequence | MGDKKRVLVI FGGQSSEHEV SRISATSILK NINLDKFDVS MIGITKDGKW LYYDGPIDKI
PSGEWEEIAL KDGTRSIADR VSLFDNIISC KNNACGLEKA SENEKSKKID VVFPVLHGCN
GEDGTIQGLF ELAGIPYVGC GVLASAVGMD KIYAKIIFEK AGIPQADYLY FTRKEIYGDV
EGVVDKIEEK FSYPVFVKPS NAGSSVGVSK AHDKNELKEA LIYAARYDRK VLIEEFINGR
EVECAVLGND DPVASTVGEI IPGNEFYDYK AKYIENTSKI KIPADLPEET VEQIRNYAVK
AFKALDCSGL ARVDFFVHKE TGKVYINEIN TMPGFTSISM YPMLWEESGI SYPELIEKLI
DLAVQRYNDN LKEYDE
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