Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1937 |
Symbol | |
ID | 4810795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2312423 |
End bp | 2313229 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640107353 |
Product | glutamate racemase |
Protein accession | YP_001038348 |
Protein GI | 125974438 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000512985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACA GGCCAATAGG TGTTTTTGAT TCGGGGCTGG GCGGTCTTAC CGTGCTGAAG GAGATAAAAA ATTTGTTGCC TCGGGAAAGT ATAGTATATT TCGGAGACAG CGGAAGAGCC CCCTATGGTT CCAAATCAAA AGAAACTGTG GTAAAATATA CTTTTCAGGA CATCCGGTTT CTTCTGAACC AGGATATAAA AATGATTGTA ATCGCGTGCA ATACGGCAAG CGCATGCAGC CTGGACCAGG TGAAAAACAG TTTTGACATT CCGATAGTTG AGGTTGTCGG GCCGGGAGCC GCAACTGCCG TCAGGGAAAC GGTAAACAAA AAAGTCGGAG TGATAGGTAC CGTGGCGACG GTGAGCAGCG GGGTTTACGA AAAAGCCATT TTAAAGCTGG ACCCGGAAAT TGAAATCTAT CAGAAGGCTT GTCCTCTGTT TGTGCCACTG GTTGAGGAAG GCTGGTGGGA AAATGACATT GCGCTGAGAA TTGCAGAGGA ATATCTTTTG CCGTTAAAAG AAAAAAACAT TGACACGCTG GTTTTGGGAT GCACCCACTA TCCCCTTTTG TACAATACCA TTTCAAAGGT GATGGGAGAC GGTGTTAAAC TGGTAAGTTC GGCATTGGAA GTGGCAAAAG TGGTAAAGGA GATGATAGAG AAGAGCAATC TTAACAGGGA TGAAAAATTA AATCCTGTGT ACAGGTATTA TACCAGTGAC AGTGTTTACA AGTTTGAATC TCTGGGCAAT TCTATTTTAA ATCATGAAAT ATGTTCTGCT GAAAAGGTTG ATATTGAAAG ATATTAG
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Protein sequence | MDNRPIGVFD SGLGGLTVLK EIKNLLPRES IVYFGDSGRA PYGSKSKETV VKYTFQDIRF LLNQDIKMIV IACNTASACS LDQVKNSFDI PIVEVVGPGA ATAVRETVNK KVGVIGTVAT VSSGVYEKAI LKLDPEIEIY QKACPLFVPL VEEGWWENDI ALRIAEEYLL PLKEKNIDTL VLGCTHYPLL YNTISKVMGD GVKLVSSALE VAKVVKEMIE KSNLNRDEKL NPVYRYYTSD SVYKFESLGN SILNHEICSA EKVDIERY
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