| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1883 |
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| Symbol | |
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| ID | 4809214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2234192 |
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| End bp | 2236258 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640107302 |
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| Product | SMC protein-like protein |
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| Protein accession | YP_001038297 |
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| Protein GI | 125974387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAT CAAAACTTTT GATAAGAAAT TTTAGAAGCA TAGAGAAAGA AAGTATTGAT
TTTAGACCTG GGAAGAATGT ATTGGTAGGT AAAAATAATT CTGGCAAGAG TAATATTGTT
AAAGCATTAG ATTTAGTTTT AGGAGAGAAG AACCCAGTAT ATTTAGATAT AAATGAGAAA
GATTTTTTTA CATATTATGA AGATGGAAAT GAAAAGGTTA AAAAAGCGTT TTTTATAGCA
GTAAAATTAG AGGGAAATGA CATTAATGAA GAATTGTTTA AAAGTATTAG TGGAGCATGG
TTAGCGACTG TAGGAGATAA AAATTTGATA GAGGATTTTT TTAATACAAG CAAAAATCCT
GAATTACTCA TAAAAAATTT TGATACTCTA AGTAACAGAA AATACTGTAA GGACACAGAA
GAGTTGTTTG ATATATTTAG AAATGCTCAA GAGTTATATA TTTATTTCTC AGTTATGAAA
AATGCTGAAA TTGAAAACAT TGATTATGAT ATGGATAATC AGCAAGGTAA TTATTCAAAA
ACATATTCAA TTTTTTTAAA GCATGGTAAC CAATATTATA GATGCTCAAA GTTTTCTAAT
GATTTGAAGA ATTCACTGAT TACAAGTGCA ATTTTATCTG CGGTTAGAGA TATAAATAAA
GAACTTAGGA TTAACACGTG GAGTTGGTAT GGAAGATTAA TAAGAGATAT TTGGGAAAAC
TGTAATCCTA GTCAAAAAAG AGAAATAGAT AAGAAACTCA GTGAAATTAA AGAAATTACT
GACGATATCT TTACTAATGC TGCATCAGAT ATAGAAGAAA AAATCAAAAA GGCTATTTAT
CATAACAGTA TATCCTTCCA ACTTCTCCAA AATACTAAAG ATGATATTTA TAAAGGAATA
AATATATTTG TTAATGATGG CGTTGAAGGT TTATTAGAGG ATAAAGGGAC AGGCATTCAG
AGTGCAGTTG TAATATCATT ATTTTCTTAT TATTGTAGTA AATTTCATAA AAACTCTTCA
CTGCTTGTGG TTGAAGAGCC AGAAATATAT TTACATCCGC AGGCTAGAAG AGTTGTCTCA
AATAAATTTG ATGAGTTTGT TAACCTTAAT TCTACAAATA GAAATCAGGT GATTATTACA
ACTCACTCAT CTGAGTTTAT AAGAAACACT GATATAGGCA ACATAATAGT AGTTAAGAAG
GTTAGTGGAA AAACAAAAAC AAGACGTATA CAAATGGAGA CAGGTAAGCA TAAAGAACTT
GCAAAACTTC AAAATATAAT ATCAACTAAG AATGCAGAAA TATTTTTTGC AGACAAAGTT
ATATTGGTAG AAGGTGGTGA GGAATATTTA ATACCATTAA TAGCAGAGCA TTATTATCAA
GAAAAAGGTT TTTTGGATTA TAACAATATT AGTGTAGCCA AAGTAGGGGG AAAATCTTTC
TTCAAGCCGT ATATGGAGGT ATTATCTTGT TTAGGAATTG AATATTATGT TATTGCTGAT
TTTGATATTC TCCATAATGG ATTAGAAGAT ATCGATGAAT TTATAAATGA GTTTTCTCAG
GAAGAATTGA ATGATATTAG AAAGTCATTA AATGAAATAA TACCAATTGA TGAGCCGTGG
ATAAAGAGCA AAGATATAAG AGAAAAATTA TTAAAACCTG ATAAAAGTAT GGATGCAAAA
TCATTATGTA CTGTTATAGA CGAAATTTGT GCTACTGAAG AATATAATGA CAAGTTAAAA
GAGATATGGC AGTATGTGAG ACCTAAAGTA ACCAAAAAAG TAAATTATAG AATATTAGAG
AATTATGAAG ATATAAAAAC TAAAGTTTAC AATTACATAG ACAAATTAAA AACAAGTAAT
ATTTTTATAC TAAAAAAAGG GGAACTAGAA GATTATATTA CTGATGATGG CCAAAAAATA
ATTGAAGATT TAGGATTTGC GAATCAAAAA GAGTTAAAAA TTATAAAGTT ATCAGAATTG
ATAAATAACG GTGAAATTGA AATAGAACAA GTGCTTGACA TTGAAGATTA TGTTGAAGTG
ATTAAAAGAC TTAAATCTAA CAGTTAA
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| Protein sequence | MFVSKLLIRN FRSIEKESID FRPGKNVLVG KNNSGKSNIV KALDLVLGEK NPVYLDINEK
DFFTYYEDGN EKVKKAFFIA VKLEGNDINE ELFKSISGAW LATVGDKNLI EDFFNTSKNP
ELLIKNFDTL SNRKYCKDTE ELFDIFRNAQ ELYIYFSVMK NAEIENIDYD MDNQQGNYSK
TYSIFLKHGN QYYRCSKFSN DLKNSLITSA ILSAVRDINK ELRINTWSWY GRLIRDIWEN
CNPSQKREID KKLSEIKEIT DDIFTNAASD IEEKIKKAIY HNSISFQLLQ NTKDDIYKGI
NIFVNDGVEG LLEDKGTGIQ SAVVISLFSY YCSKFHKNSS LLVVEEPEIY LHPQARRVVS
NKFDEFVNLN STNRNQVIIT THSSEFIRNT DIGNIIVVKK VSGKTKTRRI QMETGKHKEL
AKLQNIISTK NAEIFFADKV ILVEGGEEYL IPLIAEHYYQ EKGFLDYNNI SVAKVGGKSF
FKPYMEVLSC LGIEYYVIAD FDILHNGLED IDEFINEFSQ EELNDIRKSL NEIIPIDEPW
IKSKDIREKL LKPDKSMDAK SLCTVIDEIC ATEEYNDKLK EIWQYVRPKV TKKVNYRILE
NYEDIKTKVY NYIDKLKTSN IFILKKGELE DYITDDGQKI IEDLGFANQK ELKIIKLSEL
INNGEIEIEQ VLDIEDYVEV IKRLKSNS
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