Gene Cthe_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1833 
Symbol 
ID4809817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2173851 
End bp2174660 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content37% 
IMG OID640107247 
Productcopper amine oxidase-like protein 
Protein accessionYP_001038247 
Protein GI125974337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT CTGCAAAATT AATATTAACA ATATTTATAG TAACTATACT TTTTTCAAAT 
ATCACTTTTG CGATTAATAT ACCGCTTCGT GTGGTTGTAA ATGGAGAAGA GTTGTATTTT
CCGGATGAGA AGCCGTTCAT CGATGCGAAT GGAAGGACGC AGACACCAGC AAGGTTTATT
GGAGAAGCTT TGGGAGCAAC AGTAACGTGG GATGGAAATG CGAAAAAAGC AGTATTTAAA
ATGAGTGGAA CGACATTGGA GTTGCTTATT GGGAAAAGAG AATATCAGTT GAACGGTCAA
AAGAAGCAAA TGGATACGGA AGCGTTATTG ATAAATGGAA GGACATTTGT ACCGGCCCGT
TATGTGGCGG AAGCATTTGG TGCAACTGTT AGGTGGAAAG ATGAAATTAA AACTGTGTAC
ATAGATACAA ACAAGACAGG AAAAGTGGAA GTTGAAGGCG ATACAAGGGA AGTAGCCGGG
TTTATTGTAC CGAAAGGTAT TGATTTAATG GTTGCGGGTG CAGATGAAGA TTATAGCTAT
GAAGCAACGT TTACGATATC TTTTTTGAGA AAGAATGTTG AAAAACAGAA AGATGATATG
GAGAAAATAT TGTTACAAAG GTTGAGTGAA GAGACGGTAA AAGAGATTAT GAGTCTTGTG
AGGTCAAAGG TAAAGGATAC GGATGTTATT GAAGCAAGGT ATTTTTATGA CGAAAAGACA
GGCCAATATT TGCATTTAGC TAAGTCATGG CCAATGAGAG GATCTACAAT TTCTTTGTAT
ATATATAAAA AAGGATTCAA ACCTTTTTAG
 
Protein sequence
MRKSAKLILT IFIVTILFSN ITFAINIPLR VVVNGEELYF PDEKPFIDAN GRTQTPARFI 
GEALGATVTW DGNAKKAVFK MSGTTLELLI GKREYQLNGQ KKQMDTEALL INGRTFVPAR
YVAEAFGATV RWKDEIKTVY IDTNKTGKVE VEGDTREVAG FIVPKGIDLM VAGADEDYSY
EATFTISFLR KNVEKQKDDM EKILLQRLSE ETVKEIMSLV RSKVKDTDVI EARYFYDEKT
GQYLHLAKSW PMRGSTISLY IYKKGFKPF