Gene Cthe_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1793 
Symbol 
ID4810038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2116267 
End bp2116971 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content33% 
IMG OID640107207 
Producthypothetical protein 
Protein accessionYP_001038207 
Protein GI125974297 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA AAGAGAGCTC TGTAAGGGAA CGAATTTGGG AAATTGATGT TCTAAGAGGA 
ATTCTTGTAA TAATCATGGT GGTACTTCAT ATTTTGTTTG ACCTTGAGTT TGTTTATAAT 
ATTCCCATAG GTTACGGTAC GGGATTTATA GATAAAATAA GAATTGTTGT TGCCACGTTG 
TTTATAATGG TTTCCGGCAT CAGTACCGCC TTTAGCAAAA ATAGTTTTAA GCGGGGAGTT 
GTGGTTCTTT CTGCCGCTTT GCTTATAAGT TTTGTTACCT TTATCGTCGG CAGAGAATAT 
TTTATTTCTT TCGGTGTGCT TCATCTTATC GGTTTATGTA TGATAGTTTC ACCTTTTTTA 
AAAAAAATTC CGACTCCTTC GCTTTTAATA TTGAGTTTGA TTATTGGAAT GACTCAATTT 
GTCATTCCTT ATGTAGAAGT TTCCCACAAT TATTTTTTCA TGTTTGGGTT TTACAATGAC 
AAATTTGCTT CAGCGGATTA TTATCCTGTT TTTCCGTGGG CATGGGCTTT TTTGTTTGGT 
ATTGTGTTAA GCAGACTTTT TTACAGGGAA AAGAAAAGCA TTTTCAAGTT TACAATCAAA 
GAAAATCCTA TAGGTTTTCT TGGAAGAAAT TCGCTTTTAA TATATTTGAT TCATCAGCCA 
ATAATATTGC TGCTGTTGGC AATACTAATG AGGATTTTTG CATGA
 
Protein sequence
MIKKESSVRE RIWEIDVLRG ILVIIMVVLH ILFDLEFVYN IPIGYGTGFI DKIRIVVATL 
FIMVSGISTA FSKNSFKRGV VVLSAALLIS FVTFIVGREY FISFGVLHLI GLCMIVSPFL 
KKIPTPSLLI LSLIIGMTQF VIPYVEVSHN YFFMFGFYND KFASADYYPV FPWAWAFLFG 
IVLSRLFYRE KKSIFKFTIK ENPIGFLGRN SLLIYLIHQP IILLLLAILM RIFA