| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1760 |
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| Symbol | |
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| ID | 4810190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2079823 |
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| End bp | 2082297 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107173 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001038174 |
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| Protein GI | 125974264 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.590244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCGA GAACGGAAAC TGCTTCAAGG AGAACTCAAA AAAGTTCAAA AAAGAAGCGG
ACCAATAAAA CTGGTAGAAT AATATTGTCG ATCTTCAGGG TCATCGTCTT TTTTGCCGTC
GTCTTTTCGG TTATCATCGG AGGTATACTG GCAGGTATGA CGTTGGCTTA TGTTGCAACT
ACAGAAGACC TCACTGCCGA GCAGCTGGTG CTTACAGGGT TCACCACCCG TGTGTATGAC
TGCAACGGCA ACGAGATTAT GGCTCTACAA GGGGACAAAA ACAGGGAAAT GGTTGACTTT
AAAGATATAC CACAGGACTT AAAAGACGCT TTCGTTGCAA TTGAAGATAA ACGTTTTTAC
AAGCATCCCG GCATAGATGT GAAAAGAATA GCAGGAGCGG TAATAAATTT CTTCAAGCCC
GGAGCATCAT CTTACGGCGG TAGTACCATT ACCCAGCAGG TAATAAAAAA CCTTACCGGC
AATGACGAAA GGTCGGTCAA AAGAAAGATT CAGGAATGGA AACTCGCCTT AAGTCTTGAG
CGCAATCTCA GCAAAGACCA GATACTGGAA CTTTATTTAA ATCTCATATA TATGGGACAG
AACTGCTATG GAGTTCAGGC TGCCGCACAA ACTTATTTCA ACAAGGACGT AAGCGAACTC
ACCCTTGCTG AATGCGCTTC TCTTGCCGGA ATCACGAATT TGCCCGGCAA ATATGATCCT
TTTACCGAAA AAGGGAGAGA AAACAATATC AAGCGCCAGA GAATCATATT AAAAGAAATG
CTGGATCAGG GATATATAAC CGAAGCTGAA TACCAGAAGG CCATAAATGA AGAACTGAAA
TTCGCCGAAT CAAACAAGCG TACAGCGGAA AACGCCAGCA ATCAGCCCTA CTTTATAGAT
CAGGTTGTAA AAGACGTAAA AAGGGATCTT ATGGCACAGG GTTATTCGGA AGAAGTGGCC
ATAAGAATGA TTTATAACGG TGGACTCCAA ATATATACCA CAATGGATCC TGATATTCAA
AAAGCAATGG ACGAAGTGTT TACGGATGAA AAATATTTCA CAAAAGTAAA CAAAAAGACA
AGCCAGACTC CCCAGGCAGC CATGGTAATA ATGGACCCCA ACGGTTATGT CAGAGCCCTG
TACGGAGGCT CTGGGGAAAA AATAGGCGCA CCTCTTAACA GGGCATCGGA TCCCCAGGTG
CAGAGGCAGC CGGGTTCGAC TTTCAAACCT ATTGCCATTT ACGGGCCTGC CATAAATGAA
AGAAGAATAA CCGCTGCAAC AATCGTAGAC GACGTTCCCG TGTATATGCT GGGAGTGGAC
AAAGGTGCAT ATCCCAACAA TTTTGACTAC TCATACGCCG GACTTACCAC CATCCGCAAC
GCCATAAAAA GGTCCGTAAA CGTAGTGGCC GCCAAAGTAT GGCAGGATAT TTTAGGCCCT
GATTTGTCTT TAGAATATCT TGACAAAGTT AATTTAAACA GGGACAATGA AAGATACCTG
TCGCTGGCTC TGGGTGGACT TAACCAAGGT GTAAACCCCC TTCAAATGGC AGCGGCATAT
GTGCCTTTCG TCAGCAAAGG TATATATTAT GAACCGATGA CCTATACAAA AGTTTTGGAT
ATGAAAGGCA ATGTCATTCT GGAAAAGAAG CCAAAAAGCA CCATCGTCTA TGACGAGACT
GCCGCATATG TTATGGTTGA CATGCTGAAA AGCGTGGTAA GTGAATCAGG TGGAACTGCC
GTCGGACTTG GTCAGCTGCA AAACGGGAAA ATGCCCACAG CGGGTAAGAC CGGTACCACC
AGCCAGAACT TTGACAAATG GTTCGTAGGC TTTTCTCCTT ATTACGTTGG AGCTGTCTGG
TACGGTTATG ACTACAATGT CAGCATCTCA AGCGCTGAAT CAAACAGGGC GCTGCAAATA
TGGCATGATG TTATGGAAAA AGTACACGAG AAATTGGAGC CGATTCCGTT TGCTGAACCC
GAAGGCATTG TCAGAAAGAG AATATGCATC TACTCCGGGA AAATTGCGAC AGATTTGTGT
GCCAGTGATC CAAGGGGTTC CGCAGTCAGA ACTGAACTGT TTATCAAAGG TACGGAGCCT
TCCGATGATA ATTTATGCGA CGTCCACGTC AAAGCACGGG TTTGCAAGGA CAGTACCGAC
GCCAACGGCA AATCTCTGCT TGCCGGTGAA TACTGTCCTG AAAGTTCAGT GGAAGAAAAG
GTGTTTATAA GGCGTCCGGT TCCTTATGTG CCGGTCAAGC CCGGCGAAAA AGCACCTGCT
GATTTGATAT ATGAACTTCC GGAAGGAGAG TACTGCAATG TCCACGGTCC CGCAGAAGTG
CCGGATTTGG AGGATATTGT CGACGACATT CCGGATATCC CCAATGAGAA TTCTTCCAAC
CGAAATCCAT GGATCGACTT TTTCGATGAA CTTGACCAGA CATTCCCGCG AATATTCAGG
CGGGATGACA GATAA
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| Protein sequence | MNSRTETASR RTQKSSKKKR TNKTGRIILS IFRVIVFFAV VFSVIIGGIL AGMTLAYVAT
TEDLTAEQLV LTGFTTRVYD CNGNEIMALQ GDKNREMVDF KDIPQDLKDA FVAIEDKRFY
KHPGIDVKRI AGAVINFFKP GASSYGGSTI TQQVIKNLTG NDERSVKRKI QEWKLALSLE
RNLSKDQILE LYLNLIYMGQ NCYGVQAAAQ TYFNKDVSEL TLAECASLAG ITNLPGKYDP
FTEKGRENNI KRQRIILKEM LDQGYITEAE YQKAINEELK FAESNKRTAE NASNQPYFID
QVVKDVKRDL MAQGYSEEVA IRMIYNGGLQ IYTTMDPDIQ KAMDEVFTDE KYFTKVNKKT
SQTPQAAMVI MDPNGYVRAL YGGSGEKIGA PLNRASDPQV QRQPGSTFKP IAIYGPAINE
RRITAATIVD DVPVYMLGVD KGAYPNNFDY SYAGLTTIRN AIKRSVNVVA AKVWQDILGP
DLSLEYLDKV NLNRDNERYL SLALGGLNQG VNPLQMAAAY VPFVSKGIYY EPMTYTKVLD
MKGNVILEKK PKSTIVYDET AAYVMVDMLK SVVSESGGTA VGLGQLQNGK MPTAGKTGTT
SQNFDKWFVG FSPYYVGAVW YGYDYNVSIS SAESNRALQI WHDVMEKVHE KLEPIPFAEP
EGIVRKRICI YSGKIATDLC ASDPRGSAVR TELFIKGTEP SDDNLCDVHV KARVCKDSTD
ANGKSLLAGE YCPESSVEEK VFIRRPVPYV PVKPGEKAPA DLIYELPEGE YCNVHGPAEV
PDLEDIVDDI PDIPNENSSN RNPWIDFFDE LDQTFPRIFR RDDR
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