Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1658 |
Symbol | |
ID | 4808908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1984293 |
End bp | 1985645 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640107073 |
Product | TrkH family potassium uptake protein |
Protein accession | YP_001038074 |
Protein GI | 125974164 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.552595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAAAAT ATATAAGAAA ACTGAAATCA TTATCATACC CACAGATAAT AGCACTTGGC TACTTTCTGA TAATAATTGC CGGGACATTT TTGCTGTCAT TGCCGATAGC CAGCCGCAAT AATTTATTTC CCGGATTAAT TAATGCACTT TTTACAGCAA CCTCTGCTAC TTGTGTAACA GGGCTTGTTG TTTTTGACAC CTATACACAA TGGTCGCTAT TTGGACAAGT AGTTATTTTA CTGCTGATTC AAATAGGTGG CTTAGGGTTT ATGACGGTTG TCACAATGTT TTCTATTTTT TTAAAAAGAA AAATCGGGCT GAAAGAAAGG GGACTTTTAC GTGAAAGTAT AAATGCTATG TATATCGGTG GGATTGTACG TCTGACCAAA AGAATATTGC TTGGCACTTT GCTGTTTGAA GGTATTGGTG CAGTATTGCT ATCATTGAGG TTTATACCCA AAATGGGCTT GCTGGAAGGT ATATATAATG GCATTTTTCA CTCGGTTTCA GCTTTTTGCA ATGCCGGGTT TGACATTATG GGAAAGTACG GCAAGTATTC ATCGCTAACA AATTTCGCCG GGGATGCGGT TGTTAACTTA ACAATTATTT CACTCATCAT TGTCGGAGGA ATAGGGTTCT TTGTATGGGA TGATATTGAG AAAAATAAAT ATCATTTTAG AAAATATCAG CTACATACAA AAATAGTTTT AACGATGACC GCAATTCTTA TAGTGTCAGG GACGATATGC TTTTATATTT TTGAAAGAAA TAACCTTCTT TATGGGATGA CTACAGGAGA AAAAGTTTTA GTCTCTCTCT TTGGCGCAGT TACGCCCAGA ACAGCAGGCT TCAATACTGT TGACGTTGCA TCATTAACCT CTGCAAGTAA ACTTCTAACT ATTGTGTTGA TGTTTATAGG CGGCAGTCCC GGATCTACTG CCGGTGGGAT CAAGACTACT ACTTTAGCGG TTATTATGAT TTCGCTGTGG TCAAGCTTGA AAAATAGGAA GGGTGATAAT ATATTTGGCA GGAGACTGGA AGATAATGCA CTAAAGAGGT CGTCTGCCGT TGTGACAGTC AATATACTTC TTATACTGAG TGCGGCTTTA CTTATTAGTG CTACAAATAA AGCTTTAGGA CTTGACGCTG TTTTGTTTGA GGTTACATCT GCAATTGGTA CTGTTGGTCT TTCTACGGGA ATCACAGGTG GTCTGAATAC CTTTGCAAAA ATAATTATCA TACTATTGAT GTATAGCGGC AGAGTCGGAA GTCTTTCTTT TGCTTTGCTG TTTACAGAAC ATGGAGTGAC GTCATCTATA CAGAATCCGG TGGAAAAAAT AAATATAGGA TAG
|
Protein sequence | MRKYIRKLKS LSYPQIIALG YFLIIIAGTF LLSLPIASRN NLFPGLINAL FTATSATCVT GLVVFDTYTQ WSLFGQVVIL LLIQIGGLGF MTVVTMFSIF LKRKIGLKER GLLRESINAM YIGGIVRLTK RILLGTLLFE GIGAVLLSLR FIPKMGLLEG IYNGIFHSVS AFCNAGFDIM GKYGKYSSLT NFAGDAVVNL TIISLIIVGG IGFFVWDDIE KNKYHFRKYQ LHTKIVLTMT AILIVSGTIC FYIFERNNLL YGMTTGEKVL VSLFGAVTPR TAGFNTVDVA SLTSASKLLT IVLMFIGGSP GSTAGGIKTT TLAVIMISLW SSLKNRKGDN IFGRRLEDNA LKRSSAVVTV NILLILSAAL LISATNKALG LDAVLFEVTS AIGTVGLSTG ITGGLNTFAK IIIILLMYSG RVGSLSFALL FTEHGVTSSI QNPVEKINIG
|
| |