| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1585 |
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| Symbol | |
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| ID | 4809576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1914295 |
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| End bp | 1916019 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640107003 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001038004 |
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| Protein GI | 125974094 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCTA ATCGGTATAG AAGCTATGTA CAGAGAACAT TTTACCGTTA TACCTTTTCA
ATAATACTGT TTCTTTGCAT ATTGGTAATT TTATTTCTGA TAATTAATAT CAAATGGCTT
ACCACAAGCA AAAGTCAGAG GAACAATGCA AAGATTGCAG AGGTTTTGGA ACAGGAAATA
GTAAGTTACA AAGAAGGGTT AAAAGCTCTT GCTAACGATT ACCGTATAAT AAACTTGTGT
AAACGACAAA CAAAGGAACA GACTGCAAAT GTAAATCGCC TGCTCTATGA TTTCTCAAAT
TCTCAGGAAA TTCGTGGAGT ATTTACTCTT GTAGATTTAC AAGGAAACTT AATTTGTTCA
AATCTGTATA AAGACAATCG CAATATATTT TTGCAAAGTT TTCTGTATAA AAGTTTAGTT
TCAAAAATGT TATCAGATCC CCAGAGAACT TTTTTGGTTC CCAGTCGTCT GAATTATTCC
TATAATCAGA CGGGAGATTT GCTGATAGGA TGTACTGTGA AGGATGGAAA TGAAGCTGTA
GGCTTTTTGT TTTTTGAATT GCTTGATGAG GAAATATATG AGACTGTAAG CAGATATAAT
GTAGATGATG TGATTTTAAC CGATCAATTT AACAATTTAA TTTTTTCTAT TGGAAGACAA
AGCGAGGACT CTATGGGAAA GTATCCCGTT GGAAGTTCTC AGTTTGAAAA AAATCAAGTT
GATATAATTG AATTAAATGG GAAGCAATAT CTGATAATAA AGAGCATTCT TAACGACGGC
ACCTTGTATC TGTATACTTT GACATCTATA AGTTTCCAGC AGGATCTTTT TCGATATGCG
ATTTTGTTCG TTGTGATTAT GGGAATATTA ATACTGACAC TTCTGAAACC TCTGACTTTG
CTTGTTACAG ACAAAAATTT ACATGCCATA GAAGAGCTTA GAAAATCTAT ATTGGAAATG
GGAAGAGGGA ATATGGAGTA TTCGTTGCGT CCGCATGTTT TTGAGGAGTT TCAGGAATTG
AATGATACTT TCCGGCAAAT GGTGTTGCAG CGCGAAGAGC TTCAAAAAAG AAACAATGAG
CTGATGGAGA GAAAAAGAAT AATGGAAATC AGACAACTGG AAGAAAAAAT TAATCCTCAT
TTTTTATTTA ATGTTCTGGA AACTTTACGT TATGAGGTTA TGATTGATCC GGCTAAAGCT
TCAGAGATGA TAATGGCTTT CGCAAATATA ATGCGTTATA ACATATATTA TCGAGATACC
ATTGTACCTC TTAAGACGGA CATAGAACAT GTAAAAGATT ATTTAATGTT GCAAAAGATG
CGTTATAATC GTCGTTTGAC ATATAGTATT GATATACCTG AGGAACTTAT GGAATGTAAA
GTTCCCAAAT TAGTAATCCA ACCAATTGTA GAGAATGCAT TAAAACATGG GATGAAAAAT
GTTGAAACTA TTAATGTAAA CATTACTGCC TCCGTTGAAA ATGAAAATTT GAGGCTGAGT
GTTGAGGATA ATGGTTCAGG GATTGAACCT GAAATACTGA ACGAATTAAT TAAGGATTTG
GAAAGAGAAG ATGTATATAA AGAACACATA GGAATGTATA ATTCCCACAG AGTTATCAGA
CTGCTATACG GACCGCCGTA TGGATTAAAA ATAGAAAGTA CCTATGGAAA AGGCACAGTG
GTAAATATAA TTCTTCCAAT AAACAGGGGA GATGATAATG AATAA
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| Protein sequence | MASNRYRSYV QRTFYRYTFS IILFLCILVI LFLIINIKWL TTSKSQRNNA KIAEVLEQEI
VSYKEGLKAL ANDYRIINLC KRQTKEQTAN VNRLLYDFSN SQEIRGVFTL VDLQGNLICS
NLYKDNRNIF LQSFLYKSLV SKMLSDPQRT FLVPSRLNYS YNQTGDLLIG CTVKDGNEAV
GFLFFELLDE EIYETVSRYN VDDVILTDQF NNLIFSIGRQ SEDSMGKYPV GSSQFEKNQV
DIIELNGKQY LIIKSILNDG TLYLYTLTSI SFQQDLFRYA ILFVVIMGIL ILTLLKPLTL
LVTDKNLHAI EELRKSILEM GRGNMEYSLR PHVFEEFQEL NDTFRQMVLQ REELQKRNNE
LMERKRIMEI RQLEEKINPH FLFNVLETLR YEVMIDPAKA SEMIMAFANI MRYNIYYRDT
IVPLKTDIEH VKDYLMLQKM RYNRRLTYSI DIPEELMECK VPKLVIQPIV ENALKHGMKN
VETINVNITA SVENENLRLS VEDNGSGIEP EILNELIKDL EREDVYKEHI GMYNSHRVIR
LLYGPPYGLK IESTYGKGTV VNIILPINRG DDNE
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