| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1553 |
|---|
| Symbol | |
|---|
| ID | 4810060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1882164 |
|---|
| End bp | 1882736 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640106971 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037972 |
|---|
| Protein GI | 125974062 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TATCTATCGG TCCGGAGAAT AAATTATGTC CGCAAACATT GTTTCTGTAT
GGTACATATA AAGAGGACGG AACACCGAAC TTTGGTTTGT TTTGCTGGTT TAGTTATTGT
TGGAGTGGCG AATTGGGGGT TATGGCTTGC ATTGCCGGTG AAAAATTAAC GAAAGATCGT
ATCCGGGCAA ACAAAGTGTT TTCTGCCAAC CTTGTCAGCG AATCCTTGCT GCATCTTGCG
GATTATTTGG GCAACACGGA AGGATATAAT AGCGGGAAAA TGAACATTCC AATTGAAGTC
GAACGTGGTG CGGTATTGAA TGTTCCGGTA TTAAAGAACA GTCCGTGGGT ATTTGAGCTT
GAAGTTCAGC AATCCGTACT GCTGCATGAC GCCGAGGTTT TTCTGTGTAA AATTCGCAAT
ACATTAGTAG CCAAAGAACT TAAAGATAAT TCAATAAGTG TAGATGAACG GTTACGCATG
GCTGCACCTG TAATGTGGGT CGGAGAGGGT CAATATTATA CACTAAATTA TACAGCTTTA
GGCAAAACAG GGGACTGGAA AGACTTGGGT TAG
|
|---|
| Protein sequence | MEKISIGPEN KLCPQTLFLY GTYKEDGTPN FGLFCWFSYC WSGELGVMAC IAGEKLTKDR
IRANKVFSAN LVSESLLHLA DYLGNTEGYN SGKMNIPIEV ERGAVLNVPV LKNSPWVFEL
EVQQSVLLHD AEVFLCKIRN TLVAKELKDN SISVDERLRM AAPVMWVGEG QYYTLNYTAL
GKTGDWKDLG
|
|---|
| |