Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1540 |
Symbol | |
ID | 4810047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1867544 |
End bp | 1868959 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640106959 |
Product | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
Protein accession | YP_001037960 |
Protein GI | 125974050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATG AAATTGTCTG CGGAATTGAA ACCCATATTG AACTGGCAAC CAAAACCAAG ATTTTTTGCG GCTGCACCAC CGAATTCGGG GGAGAGCCCA ACACCCATTG CTGCCCTGTT TGCACGGGTC AGCCGGGATC CCTTCCCATT CTCAACCAAA AAGTGGTGGA ATATGCCATT AAAGCCGGCT TGGCGCTGAA CTGCAAAATC AATACCAAGT CCCATATGGA CCGAAAGAAT TATGTATATC CCGATTTGCC GAAAGCCTAC CAGATTTCGC AATATGATGA GCCCCTCTGT GAAAAGGGCT ATATCGAACT GGACAGCGGC AAGCGTATCG GCATTACCCG CATTCATATC GAGGAAGATG CCGGAAAGCT CGTCCATGAG AACGGGTATA CCTATATTGA CTATAACCGC AGCGGTGTTC CGCTGATTGA AATAGTTTCC GAGCCTGATA TTTCTTCCGC CGAAGAGGCA AGGGAGTATG CCGAAAAGCT GCAACTTATC ATGCGCTATA TCGGCATATC GGACTGCAAG ATGCAGGAAG GTTCCATGCG CTGCGATGTC AATCTTTCAC TGCGAAAGCC CGGTGATTCC CGTTTCGGCG TAAGAACCGA AATCAAGAAT ATCAACTCCC TGAGTTTCAT TCAAAAGGCC GTCATGGCCG AGGCGGAAAG GCAGGCCGAT ATTCTGGATG CCGGTGGAAC CGTTGTTCAG CAGACTATGC GTTACGACGA GGCAACCAAT AGCGTCAGTC CTATGCGTGA CAAGGAAAAC TCCGATGATT ACCGCTATTT CCCTGATCCC GATATTCTGA GGTTCAGTAT CAATGATGAG AAGGTGGAAG AAATTCGGGC GTCCTTGCCT GAGCTGCCCT TTGACAAGCT CAAGCGGTAC GTGAATGTCC TGGGTCTTCC TGAGGCAACA GCCAGACAGA TTTTCAGGTA TAGAAAGGTG GCTGAATTTT TCGAAGGCGC GCTGGCGGAG GGTGCAAGCG TTAAAAATGC GGCCAACCTG ATTGTCGGTA CCATCTTTTC CAATATGGAC ACCGAGGAGG AAAAGGAATT ATTTGACATC AGGATTTCCT CTGCCCAGTT TGCCGCGCTT GTAAAGCTTG CCGATGAGAA GAAAATTAAC ATCGGAGTTG CCCAGAGCAC TTTGCAAAAA ATGCTGGAGA GCGGCAAACC GGTGGAGGAG TTTATTAAGC CGGAAGATCT TGCGGGTATT TCCGATGAGG AGCTTGAAAG CTTATGTAAG GAAGCCATCG ATGCCAATCC CAAGGCGGTG GCCGATGTCA GAAGCGGTAA GGACAAAGCC ATCAATGTGA TGTTCGGATA CATTATGAAA AAAACCGGCG GGAAGGCAGA TATCCGCAAG GTTGAAGTTT TGTTGCGAAA ATTGATTGGA CAATAA
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Protein sequence | MNYEIVCGIE THIELATKTK IFCGCTTEFG GEPNTHCCPV CTGQPGSLPI LNQKVVEYAI KAGLALNCKI NTKSHMDRKN YVYPDLPKAY QISQYDEPLC EKGYIELDSG KRIGITRIHI EEDAGKLVHE NGYTYIDYNR SGVPLIEIVS EPDISSAEEA REYAEKLQLI MRYIGISDCK MQEGSMRCDV NLSLRKPGDS RFGVRTEIKN INSLSFIQKA VMAEAERQAD ILDAGGTVVQ QTMRYDEATN SVSPMRDKEN SDDYRYFPDP DILRFSINDE KVEEIRASLP ELPFDKLKRY VNVLGLPEAT ARQIFRYRKV AEFFEGALAE GASVKNAANL IVGTIFSNMD TEEEKELFDI RISSAQFAAL VKLADEKKIN IGVAQSTLQK MLESGKPVEE FIKPEDLAGI SDEELESLCK EAIDANPKAV ADVRSGKDKA INVMFGYIMK KTGGKADIRK VEVLLRKLIG Q
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