| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1519 |
|---|
| Symbol | |
|---|
| ID | 4810557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1843585 |
|---|
| End bp | 1844814 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640106939 |
|---|
| Product | SAM-dependent methyltransferase |
|---|
| Protein accession | YP_001037940 |
|---|
| Protein GI | 125974030 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.197853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC AACGGCAGTA TCCCAAAATT ATGATATCCC GTAAGGCGGA GCGCAGCGTA
AAAGACGGAC ATCCATGGAT ATACGGAGAA GAAATTCTCA AAACAGAGGG CGAACTCCAA
AACGGCGGTC TGGTGGATGT GTTTGCCGGA AACGCCTTTA TGGGGACAGG TTTTTACAAT
AGTGTCAGCA AGATTACCGT TCGACTTATT TCACGCAACG CCAATGATGT ATTTGACGCC
CGCTTTTGGC GCCGCCGGGT GGAATATGCC GTTCGCTACC GCAAAACCGT CATACCCGGT
GCAGACTTTG CCTGTTGCCG CCTGATTCAC GGTGAGGCTG ACCATATGCC GGGTCTGACA
GTGGACCGCT ATGGAAGCCT TTTGTCCGTA CAAATTACCT GTCTTGGCAT GGAACTTGTC
AAGGATACGG TTTACCGCGC TCTCTGGGAT GTGCTTACCG AAATGGATGA AACCATCACA
GGTATTTATG AACGCAATGA CATTGCCCTG CGTACACGGG AAGGACTGCC GGAATATAAA
GGCTGGTACC TGTTCGATGG CATACCCAGG CCGGAATCTG CTGTGACTGA AATATGCGAA
AACGGCATAA AGTATCTGGT GGATGTAGAG AACGGGCAGA AAACCGGCTT TTTCCTGGAT
CAGAAATATA ACCGTGCCGC TGTGGCCCGA ATTGCCAAGG GCAAACGTGT GCTGGACTGT
TTTACCCATA CCGGTTCCTT CGGCCTTAAT GCAGCCCTGG GGGGAGCCGA GCATGTGACC
TGTGTTGACA TCTCACAGTC AGCCATAGAC ATGGCAAAAG CAAATGCCGT ACGCAACGGT
CTGGACGGAA AAATGGATTT TGTCTGTGAA GATGTTTTTG ATTTGCTCAC AAAACTGGCA
GAACAAAAAT GCCATGACTA TGATTATATC ATTCTTGACC CGCCGGCTTT TACCAAATCC
CGCAAGACGG TGCAGTCTGC CGCCCGCGGA TATAAAGAAA TTAACCTCAA AGCCATGAAA
CTGCTGCCCC GCGGCGGATA TCTGGCTACT TGCAGCTGCA GTCATTTCAT GACGGATGAC
TTGTTCCGCA AAACACTGGC AAGCGCCGCA AAGGATGCTT CCGTATCCTT AAGGCAGATT
GAAGCCCGTC AGCAGGCCCC GGACCATCCC ATCCTGTGGA ATGTTCCGGA GACGGACTAT
TTAAAGTTTT ATATTTTTCA GGTTGTATAA
|
|---|
| Protein sequence | MKQQRQYPKI MISRKAERSV KDGHPWIYGE EILKTEGELQ NGGLVDVFAG NAFMGTGFYN
SVSKITVRLI SRNANDVFDA RFWRRRVEYA VRYRKTVIPG ADFACCRLIH GEADHMPGLT
VDRYGSLLSV QITCLGMELV KDTVYRALWD VLTEMDETIT GIYERNDIAL RTREGLPEYK
GWYLFDGIPR PESAVTEICE NGIKYLVDVE NGQKTGFFLD QKYNRAAVAR IAKGKRVLDC
FTHTGSFGLN AALGGAEHVT CVDISQSAID MAKANAVRNG LDGKMDFVCE DVFDLLTKLA
EQKCHDYDYI ILDPPAFTKS RKTVQSAARG YKEINLKAMK LLPRGGYLAT CSCSHFMTDD
LFRKTLASAA KDASVSLRQI EARQQAPDHP ILWNVPETDY LKFYIFQVV
|
|---|
| |