Gene Cthe_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1493 
Symbol 
ID4810643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1813637 
End bp1814251 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content40% 
IMG OID640106913 
ProductPadR family transcriptional regulator 
Protein accessionYP_001037914 
Protein GI125974004 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.170448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTATATA TTGACAATAT TCCACTTGTG GAATATAATA ATATTATACA AGTGGAATAT 
GTGGTGATAA ATATGCTAAA ACACGGAATA TTGGGTTTGT TAAATTACGG TGATATGACA 
GGATACGAAA TCATGAAAGT ATTCAGAGAC TCCTTAAGCT TCTTCTGGAC TGCAAATACC 
AGTCAAATCT ACCGGGAGCT TAATACCCTG AAAAAAGACG GATTTGTGAC AGACATTGTT 
GTGAAACAAA CCGGAAAGCC CGACAAAAAA GTGTTTTCCA TAACCGAAAG CGGACGGGAA 
GAGCTGAAAC GCTGGCTGAG AGAGTACGAC TACGGAAACA GGAATAGTCC TCTGTGCATG 
AAAGTGTTTT TCTCCGGAGA GTTACCGAAA GAAGAAAATA TAGAACGCCT CCGGGAAATA 
AAAAATGAGG CGCAGCAGGC CATAGAGAGG TACTCTTCCG TATTTGAAAC CATGAAAATT 
TATAAGGGGA TGGTAGCACG TCCTGAGGAT TCTGTTTATT GGAATATGAC CGTAGAGTAC 
GGAATACGTT ATATGAAGAT GTTGTCAGAA TGGTGCGACT GCTGCATTAA AATTCTGGAG 
GATGTTGAAA AATGA
 
Protein sequence
MLYIDNIPLV EYNNIIQVEY VVINMLKHGI LGLLNYGDMT GYEIMKVFRD SLSFFWTANT 
SQIYRELNTL KKDGFVTDIV VKQTGKPDKK VFSITESGRE ELKRWLREYD YGNRNSPLCM 
KVFFSGELPK EENIERLREI KNEAQQAIER YSSVFETMKI YKGMVARPED SVYWNMTVEY 
GIRYMKMLSE WCDCCIKILE DVEK