Gene Cthe_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1486 
Symbol 
ID4810636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1806933 
End bp1807328 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content40% 
IMG OID640106907 
ProductNUDIX hydrolase 
Protein accessionYP_001037908 
Protein GI125973998 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00282357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAA TCAGAGTTAC GGCAGGGATC ATTATAAACA ATGACAAAGT TTTAATTACC 
CGGCGTGCGC CAAACGAAAA CTTTGCCGGT GGATGGGAGT TTCCTGGCGG AAAAATTGAG
GCTGATGAAA CCCCTGAGGA ATGTCTTGCA AGAGAGCTTA AAGAGGAGCT TAATATAACT
GTTTCCGTTG AGGGATTTTG TACAGAGGTT CCTTATGATT ACGATGACAT AAGCATTGAT
TTGATTGCGT ATTATTGTAC TATAGTTGAC GGCGAAATTC AGATGTCGGT GCATGACAAA
TACAAGTGGG TGAAAATAGA AGATTTATTG AACTATGACC TCTTACCTGC GGATGTTCCA
ATAGCAAAAA GAGTTGTGAA GGAAAAAGGA AGCTAA
 
Protein sequence
MERIRVTAGI IINNDKVLIT RRAPNENFAG GWEFPGGKIE ADETPEECLA RELKEELNIT 
VSVEGFCTEV PYDYDDISID LIAYYCTIVD GEIQMSVHDK YKWVKIEDLL NYDLLPADVP
IAKRVVKEKG S