Gene Cthe_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1484 
Symbol 
ID4810634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1804733 
End bp1805443 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID640106905 
Producttranscriptional regulator 
Protein accessionYP_001037906 
Protein GI125973996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000331721 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGAAC AGATACTGGC TGTGCAGAGG ATGCAGGATT ATATTGAAGC TCATATTCAT 
GAGGAGATTA CACTTGCGGA TTTGGCAAGA GTATCGCATC AAAGAGCTTT TGCCCGCGAA 
TTTGGCTGCA ATCCGAAGCA ATATGCCGAA AATCCGGTTC CCCTCTGTTT GTTTAAGCCT 
TACAGCGTTA AATCCCGGTA CCTTGGAAGG AGGAATGGTT CGATGGAAAA GGTAAAAACT 
GTGTTTGTCC AGTTAACCGA AAGGCCTGCC CGCAAAGTAA TTATTAAACG CGGAATCAAG 
GCAACTCATT ATTTTGAGTA TTGTGAAGAA GTTGGCTGTG ATGTGTGGAG CTTGCTCACC 
AGTATTAAAT CCATCAGCGG AGAGCCGGTT TGTATGTGGC TGCCGGAGCG TTACCGCAAA 
CCCGGAACAA GCGAGTATGT GCAGGGAGTG GAAGTGCCTG TGGATTATGA CGGTATTATT 
CCTGACGGTT TTGACGTTAT TGAACTTCCT GCAGCAAAGT ATCTGATGTT TCAGGGAGAG 
CCTTTTGCGG AAGAAGACTA TGAGCAGGCT ATCGAAGAAG TATGGGAAGC TGAAAAGAAA 
TATAACCCAT CAGTTATTGG ATATGAGTGG GACCAGGATA ATCCTCGAAT TCAGCTGGAG 
CCCATTGGTT CGCGAGGGTA CATTGAGTTT GTTCCGATCA AGCCTGTGTA A
 
Protein sequence
MREQILAVQR MQDYIEAHIH EEITLADLAR VSHQRAFARE FGCNPKQYAE NPVPLCLFKP 
YSVKSRYLGR RNGSMEKVKT VFVQLTERPA RKVIIKRGIK ATHYFEYCEE VGCDVWSLLT 
SIKSISGEPV CMWLPERYRK PGTSEYVQGV EVPVDYDGII PDGFDVIELP AAKYLMFQGE 
PFAEEDYEQA IEEVWEAEKK YNPSVIGYEW DQDNPRIQLE PIGSRGYIEF VPIKPV