Gene Cthe_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1394 
Symbol 
ID4809055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1703851 
End bp1704561 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID640106818 
Producttwo component transcriptional regulator 
Protein accessionYP_001037819 
Protein GI125973909 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.4965e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA AGTTAATTTA TATAGTGGAA GACGAAAAGC ATATTCAGGA ATTGCTAAGG 
TTTAATCTTG AGGAGAACGG CTATGAGGTG GAGTGCTTTG AAGACGGTGA GACCATGTTT
GAGGTTGTGG AGAGGAAAAA GCCGGACCTC TTCGTTCTGG ATATAATGCT TCCGGGTGTG
GACGGGTTTG AAATTTGCAA AAAAATCAAG GAGAATTATG ACTTAAAGAA AATACCCATA
ATTATGCTTA CTGCCAAAAA TGATGAGCTT GACAGGGTTT TGGGGCTTGA GCTTGGCGCG
GACGATTATA TTTCAAAACC CTTTAGTGTC CGGGAATTTG TAGCAAGGGT AAAGGTTGCC
TTCAGAAGGC AGGCGGATTC TTTTGAAAAC AGTCCTAAAA GAGTTAATGT CGGAAGAATA
ACCATAGATT TTGAAAGGCG CGAGGTTTAC AAGGACAATC AGATAATTGA AATGACCTTT
AAGGAGTTTG AGCTTTTAAA ACTGTTGATT ATGAACAGAG GCAAAGTTCT TTCGCGGGAC
ATGCTGCTTC AGAAAATCTG GGGATTTGAC TTTTTTGGAG AAACAAGGAC CGTGGATGTG
CACATAAGAT ATTTGAGACA AAAAATTGAA GATGACGACA ACAATCCCGT ATATATTGAA
ACCGTAAGAT GTATAGGTTA TCGGTTTAGT GATAAAGAGG TTCGGGAGTA A
 
Protein sequence
MAKKLIYIVE DEKHIQELLR FNLEENGYEV ECFEDGETMF EVVERKKPDL FVLDIMLPGV 
DGFEICKKIK ENYDLKKIPI IMLTAKNDEL DRVLGLELGA DDYISKPFSV REFVARVKVA
FRRQADSFEN SPKRVNVGRI TIDFERREVY KDNQIIEMTF KEFELLKLLI MNRGKVLSRD
MLLQKIWGFD FFGETRTVDV HIRYLRQKIE DDDNNPVYIE TVRCIGYRFS DKEVRE